Experiment: methionine 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0826 and DvMF_0827 overlap by 8 nucleotides DvMF_0827 and DvMF_0828 are separated by 290 nucleotides DvMF_0828 and DvMF_0829 are separated by 221 nucleotides
DvMF_0826: DvMF_0826 - cytochrome c assembly protein (RefSeq), at 997,540 to 999,438
_0826
DvMF_0827: DvMF_0827 - Tetratricopeptide TPR_2 repeat protein (RefSeq), at 999,431 to 1,000,003
_0827
DvMF_0828: DvMF_0828 - hypothetical protein (RefSeq), at 1,000,294 to 1,000,659
_0828
DvMF_0829: DvMF_0829 - alpha/beta hydrolase fold protein (RefSeq), at 1,000,881 to 1,001,873
_0829
Position (kb) 999
1000
1001 Strain fitness (log2 ratio) -1
0
1 at 998.527 kb on - strand, within DvMF_0826 at 998.858 kb on + strand, within DvMF_0826 at 998.948 kb on - strand, within DvMF_0826 at 998.986 kb on + strand, within DvMF_0826 at 999.115 kb on + strand, within DvMF_0826 at 999.207 kb on - strand, within DvMF_0826 at 999.308 kb on + strand at 999.954 kb on - strand at 1000.103 kb on - strand at 1000.108 kb on - strand at 1000.610 kb on + strand, within DvMF_0828 at 1000.658 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction methionine 1 mM remove 998,527 - DvMF_0826 0.52 -0.4 998,858 + DvMF_0826 0.69 -0.1 998,948 - DvMF_0826 0.74 +0.1 998,986 + DvMF_0826 0.76 +0.6 999,115 + DvMF_0826 0.83 -0.2 999,207 - DvMF_0826 0.88 +0.4 999,308 + -0.1 999,954 - -0.8 1,000,103 - -0.2 1,000,108 - -0.0 1,000,610 + DvMF_0828 0.86 +0.0 1,000,658 + -0.2
Or see this region's nucleotide sequence