Experiment: methionine 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0824 and DvMF_0825 are separated by 293 nucleotides DvMF_0825 and DvMF_0826 are separated by 467 nucleotides DvMF_0826 and DvMF_0827 overlap by 8 nucleotides DvMF_0827 and DvMF_0828 are separated by 290 nucleotides
DvMF_0824: DvMF_0824 - signal transduction histidine kinase, nitrogen specific, NtrB (RefSeq), at 994,692 to 996,542
_0824
DvMF_0825: DvMF_0825 - hypothetical protein (RefSeq), at 996,836 to 997,072
_0825
DvMF_0826: DvMF_0826 - cytochrome c assembly protein (RefSeq), at 997,540 to 999,438
_0826
DvMF_0827: DvMF_0827 - Tetratricopeptide TPR_2 repeat protein (RefSeq), at 999,431 to 1,000,003
_0827
DvMF_0828: DvMF_0828 - hypothetical protein (RefSeq), at 1,000,294 to 1,000,659
_0828
Position (kb) 997
998
999
1000 Strain fitness (log2 ratio) -1
0
1 at 996.749 kb on + strand at 997.090 kb on + strand at 997.204 kb on - strand at 997.224 kb on - strand at 997.229 kb on - strand at 997.312 kb on + strand at 997.335 kb on - strand at 997.379 kb on + strand at 997.527 kb on - strand at 997.715 kb on - strand at 997.768 kb on + strand, within DvMF_0826 at 997.779 kb on + strand, within DvMF_0826 at 997.797 kb on + strand, within DvMF_0826 at 997.802 kb on + strand, within DvMF_0826 at 997.966 kb on + strand, within DvMF_0826 at 998.050 kb on + strand, within DvMF_0826 at 998.224 kb on - strand, within DvMF_0826 at 998.376 kb on - strand, within DvMF_0826 at 998.527 kb on - strand, within DvMF_0826 at 998.858 kb on + strand, within DvMF_0826 at 998.948 kb on - strand, within DvMF_0826 at 998.986 kb on + strand, within DvMF_0826 at 999.115 kb on + strand, within DvMF_0826 at 999.207 kb on - strand, within DvMF_0826 at 999.308 kb on + strand at 999.954 kb on - strand at 1000.103 kb on - strand at 1000.108 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction methionine 1 mM remove 996,749 + -0.4 997,090 + -0.5 997,204 - -0.1 997,224 - -0.9 997,229 - -0.7 997,312 + +0.3 997,335 - +0.2 997,379 + -0.3 997,527 - -0.4 997,715 - -0.5 997,768 + DvMF_0826 0.12 +0.0 997,779 + DvMF_0826 0.13 -0.2 997,797 + DvMF_0826 0.14 -0.5 997,802 + DvMF_0826 0.14 -0.2 997,966 + DvMF_0826 0.22 +0.0 998,050 + DvMF_0826 0.27 -0.4 998,224 - DvMF_0826 0.36 -0.3 998,376 - DvMF_0826 0.44 +0.4 998,527 - DvMF_0826 0.52 -0.4 998,858 + DvMF_0826 0.69 -0.1 998,948 - DvMF_0826 0.74 +0.1 998,986 + DvMF_0826 0.76 +0.6 999,115 + DvMF_0826 0.83 -0.2 999,207 - DvMF_0826 0.88 +0.4 999,308 + -0.1 999,954 - -0.8 1,000,103 - -0.2 1,000,108 - -0.0
Or see this region's nucleotide sequence