Experiment: methionine 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0587 and DvMF_0588 overlap by 4 nucleotides DvMF_0588 and DvMF_0589 overlap by 4 nucleotides
DvMF_0587: DvMF_0587 - hypothetical protein (RefSeq), at 696,310 to 697,458
_0587
DvMF_0588: DvMF_0588 - hypothetical protein (RefSeq), at 697,455 to 698,219
_0588
DvMF_0589: DvMF_0589 - glycosyl transferase, group 2 family protein (RefSeq), at 698,216 to 699,343
_0589
Position (kb) 697
698
699 Strain fitness (log2 ratio) -1
0
1 at 696.629 kb on + strand, within DvMF_0587 at 696.824 kb on + strand, within DvMF_0587 at 696.837 kb on - strand, within DvMF_0587 at 696.855 kb on + strand, within DvMF_0587 at 696.868 kb on + strand, within DvMF_0587 at 696.878 kb on + strand, within DvMF_0587 at 697.069 kb on + strand, within DvMF_0587 at 697.129 kb on + strand, within DvMF_0587 at 697.154 kb on + strand, within DvMF_0587 at 697.201 kb on + strand, within DvMF_0587 at 697.204 kb on - strand, within DvMF_0587 at 697.443 kb on - strand at 697.493 kb on + strand at 697.501 kb on - strand at 697.810 kb on - strand, within DvMF_0588 at 697.845 kb on + strand, within DvMF_0588 at 697.979 kb on + strand, within DvMF_0588 at 698.076 kb on - strand, within DvMF_0588 at 698.177 kb on + strand at 698.285 kb on - strand at 698.310 kb on + strand at 698.382 kb on - strand, within DvMF_0589 at 698.506 kb on - strand, within DvMF_0589 at 698.547 kb on - strand, within DvMF_0589 at 698.932 kb on - strand, within DvMF_0589 at 699.128 kb on + strand, within DvMF_0589
Per-strain Table
Position Strand Gene LocusTag Fraction methionine 1 mM remove 696,629 + DvMF_0587 0.28 +0.3 696,824 + DvMF_0587 0.45 -0.4 696,837 - DvMF_0587 0.46 -0.2 696,855 + DvMF_0587 0.47 +0.5 696,868 + DvMF_0587 0.49 -0.4 696,878 + DvMF_0587 0.49 -0.3 697,069 + DvMF_0587 0.66 -0.3 697,129 + DvMF_0587 0.71 -0.4 697,154 + DvMF_0587 0.73 +0.3 697,201 + DvMF_0587 0.78 -0.7 697,204 - DvMF_0587 0.78 -1.0 697,443 - -0.4 697,493 + -0.4 697,501 - -0.7 697,810 - DvMF_0588 0.46 -0.9 697,845 + DvMF_0588 0.51 -1.0 697,979 + DvMF_0588 0.68 -1.2 698,076 - DvMF_0588 0.81 -0.5 698,177 + -0.5 698,285 - -0.4 698,310 + -0.3 698,382 - DvMF_0589 0.15 -0.6 698,506 - DvMF_0589 0.26 -0.6 698,547 - DvMF_0589 0.29 -0.6 698,932 - DvMF_0589 0.63 -0.4 699,128 + DvMF_0589 0.81 -0.5
Or see this region's nucleotide sequence