Experiment: methionine 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0184 and DvMF_0185 are separated by 57 nucleotides DvMF_0185 and DvMF_0186 are separated by 84 nucleotides DvMF_0186 and DvMF_0187 are separated by 174 nucleotides DvMF_0187 and glpX are separated by 235 nucleotides
DvMF_0184: DvMF_0184 - pyruvate flavodoxin/ferredoxin oxidoreductase domain protein (RefSeq), at 200,775 to 202,466
_0184
DvMF_0185: DvMF_0185 - pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit (RefSeq), at 202,524 to 203,375
_0185
DvMF_0186: DvMF_0186 - hypothetical protein (RefSeq), at 203,460 to 203,807
_0186
DvMF_0187: DvMF_0187 - hypothetical protein (RefSeq), at 203,982 to 204,512
_0187
DvMF_0188: glpX - fructose 1,6-bisphosphatase II (RefSeq), at 204,748 to 205,731
glpX
Position (kb) 203
204 Strain fitness (log2 ratio) -1
0
1 at 202.461 kb on + strand at 202.558 kb on - strand at 202.747 kb on + strand, within DvMF_0185 at 202.981 kb on - strand, within DvMF_0185 at 203.371 kb on - strand at 203.548 kb on + strand, within DvMF_0186 at 203.573 kb on + strand, within DvMF_0186 at 203.573 kb on - strand, within DvMF_0186 at 203.603 kb on + strand, within DvMF_0186 at 203.783 kb on + strand at 203.951 kb on - strand at 204.129 kb on - strand, within DvMF_0187 at 204.306 kb on - strand, within DvMF_0187 at 204.404 kb on - strand, within DvMF_0187 at 204.413 kb on + strand, within DvMF_0187 at 204.525 kb on + strand at 204.626 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction methionine 1 mM remove 202,461 + -0.4 202,558 - -0.4 202,747 + DvMF_0185 0.26 -0.3 202,981 - DvMF_0185 0.54 -0.4 203,371 - -0.8 203,548 + DvMF_0186 0.25 -0.5 203,573 + DvMF_0186 0.32 -0.3 203,573 - DvMF_0186 0.32 -0.6 203,603 + DvMF_0186 0.41 -0.4 203,783 + -0.4 203,951 - -0.1 204,129 - DvMF_0187 0.28 -0.4 204,306 - DvMF_0187 0.61 -0.5 204,404 - DvMF_0187 0.79 -0.3 204,413 + DvMF_0187 0.81 -0.6 204,525 + +0.6 204,626 - -0.6
Or see this region's nucleotide sequence