Experiment: methionine 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0156 and DvMF_0157 are separated by 434 nucleotides DvMF_0157 and DvMF_0158 are separated by 213 nucleotides DvMF_0158 and DvMF_0159 are separated by 247 nucleotides
DvMF_0156: DvMF_0156 - NADPH-dependent FMN reductase (RefSeq), at 171,170 to 171,736
_0156
DvMF_0157: DvMF_0157 - hypothetical protein (RefSeq), at 172,171 to 172,386
_0157
DvMF_0158: DvMF_0158 - HesB-like domain-containing protein (RefSeq), at 172,600 to 172,920
_0158
DvMF_0159: DvMF_0159 - HesB-like domain-containing protein (RefSeq), at 173,168 to 173,461
_0159
Position (kb) 172
173 Strain fitness (log2 ratio) -1
0
1 at 171.472 kb on + strand, within DvMF_0156 at 171.732 kb on - strand at 171.786 kb on + strand at 171.987 kb on - strand at 172.020 kb on + strand at 172.196 kb on + strand, within DvMF_0157 at 172.222 kb on + strand, within DvMF_0157 at 172.553 kb on + strand at 172.781 kb on + strand, within DvMF_0158 at 172.995 kb on + strand at 173.018 kb on - strand at 173.028 kb on + strand at 173.235 kb on + strand, within DvMF_0159 at 173.295 kb on + strand, within DvMF_0159
Per-strain Table
Position Strand Gene LocusTag Fraction methionine 1 mM remove 171,472 + DvMF_0156 0.53 -0.5 171,732 - -0.8 171,786 + -0.2 171,987 - -0.1 172,020 + -0.5 172,196 + DvMF_0157 0.12 -0.3 172,222 + DvMF_0157 0.24 -0.2 172,553 + -0.2 172,781 + DvMF_0158 0.56 -0.7 172,995 + -0.3 173,018 - -0.0 173,028 + -0.6 173,235 + DvMF_0159 0.23 -0.8 173,295 + DvMF_0159 0.43 -0.4
Or see this region's nucleotide sequence