Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_4163
Experiment: m.b. benzoic 0.32 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. benzoic 0.32 mg/ml |
---|---|---|---|---|---|
remove | |||||
10,045 | - | Dshi_4162 | 0.31 | +3.1 | |
10,362 | + | Dshi_4162 | 0.61 | -1.8 | |
10,371 | - | Dshi_4162 | 0.62 | +0.3 | |
10,845 | + | -2.0 | |||
11,084 | - | Dshi_4163 | 0.20 | -3.7 | |
11,108 | - | +1.9 | |||
11,169 | + | Dshi_4163 | 0.26 | -0.7 | |
11,177 | - | Dshi_4163 | 0.26 | -3.9 | |
11,383 | + | Dshi_4163 | 0.39 | -1.3 | |
11,663 | - | Dshi_4163 | 0.57 | +0.3 | |
11,731 | - | Dshi_4163 | 0.61 | -0.7 | |
11,771 | - | Dshi_4163 | 0.64 | +1.3 | |
11,883 | - | Dshi_4163 | 0.71 | +3.8 | |
11,898 | - | Dshi_4163 | 0.72 | +1.9 | |
12,399 | - | -0.3 | |||
12,488 | + | Dshi_4164 | 0.18 | -1.3 | |
12,536 | - | Dshi_4164 | 0.24 | +1.3 | |
12,845 | + | Dshi_4164 | 0.63 | -2.7 | |
12,955 | - | Dshi_4164 | 0.76 | -2.0 | |
13,142 | + | +0.3 | |||
13,142 | + | +2.6 | |||
13,150 | - | -1.7 | |||
13,272 | + | Dshi_4165 | 0.14 | -0.7 | |
13,272 | + | Dshi_4165 | 0.14 | -1.7 |
Or see this region's nucleotide sequence