Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_R0052
Experiment: m.b. benzoic 0.32 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. benzoic 0.32 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,779,785 | + | +0.8 | |||
3,779,896 | + | -2.2 | |||
3,779,897 | + | -2.6 | |||
3,780,039 | + | -0.0 | |||
3,780,132 | + | Dshi_3590 | 0.11 | +1.0 | |
3,780,144 | - | Dshi_3590 | 0.13 | -2.4 | |
3,780,208 | + | Dshi_3590 | 0.19 | -0.4 | |
3,780,211 | - | Dshi_3590 | 0.20 | -1.1 | |
3,780,213 | + | Dshi_3590 | 0.20 | +0.7 | |
3,780,316 | - | Dshi_3590 | 0.30 | +1.4 | |
3,780,331 | + | Dshi_3590 | 0.32 | -1.3 | |
3,780,408 | + | Dshi_3590 | 0.40 | -0.0 | |
3,780,533 | + | Dshi_3590 | 0.52 | -0.8 | |
3,780,641 | + | Dshi_3590 | 0.63 | +0.4 | |
3,780,664 | - | Dshi_3590 | 0.66 | -1.6 |
Or see this region's nucleotide sequence