Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_3110

Experiment: m.b. benzoic 0.32 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. benzoic 0.32 mg/ml
3,275,621	+		Dshi_3109	0.56	-1.3
3,276,030	+		Dshi_3109	0.77	-0.7
3,276,038	-		Dshi_3109	0.77	+0.1
3,276,040	+		Dshi_3109	0.78	-1.9
3,276,146	+		Dshi_3109	0.83	-1.4
3,276,153	+		Dshi_3109	0.83	-0.0
3,276,161	-		Dshi_3109	0.84	-1.0
3,276,185	-		Dshi_3109	0.85	+1.9
3,276,191	+		Dshi_3109	0.85	+3.2
3,276,191	+		Dshi_3109	0.85	+1.4
3,276,224	-		Dshi_3109	0.87	+1.8
3,276,260	-		Dshi_3109	0.89	+1.0
3,276,338	-				-0.3
3,276,371	+				+0.8
3,276,439	-				-0.8
3,276,512	+				-0.4
3,276,520	-				-2.4
3,276,552	-				-1.9
3,276,802	+		Dshi_3110	0.46	+1.9
3,276,830	+		Dshi_3110	0.50	-1.9
3,276,888	+		Dshi_3110	0.59	-0.6
3,277,165	-				+0.2
3,277,230	-				+0.3
3,277,262	+				+0.6
3,277,270	-				+0.2
3,277,270	-				+1.9
3,277,306	+				-1.7
3,277,306	+				-0.4
3,277,314	-				-0.3
3,277,314	-				+1.4
3,277,392	+				-3.9
3,277,402	+				-2.2
3,277,405	-				-0.7
3,277,418	-				+1.6
3,277,498	+				-0.7
3,277,579	-				+0.9
3,277,619	-				-0.2
3,277,655	-		Dshi_3111	0.10	-1.0
3,277,695	+		Dshi_3111	0.13	+0.4
3,277,712	+		Dshi_3111	0.14	-0.9
3,277,714	+		Dshi_3111	0.14	-1.1
3,277,714	+		Dshi_3111	0.14	-0.6
3,277,727	+		Dshi_3111	0.15	-0.4
3,277,727	+		Dshi_3111	0.15	+0.8
3,277,727	+		Dshi_3111	0.15	+3.4
3,277,727	+		Dshi_3111	0.15	-0.4
3,277,735	-		Dshi_3111	0.15	-0.5
3,277,735	-		Dshi_3111	0.15	-1.2
3,277,735	-		Dshi_3111	0.15	+0.1
3,277,735	-		Dshi_3111	0.15	-1.4
3,277,735	-		Dshi_3111	0.15	-1.2
3,277,735	-		Dshi_3111	0.15	-0.8
3,277,735	-		Dshi_3111	0.15	-1.3
3,277,758	-		Dshi_3111	0.17	-0.2
3,277,770	+		Dshi_3111	0.17	+1.2
3,277,785	-		Dshi_3111	0.18	+0.3
3,277,853	+		Dshi_3111	0.23	-0.4
3,277,968	-		Dshi_3111	0.30	-2.7
3,277,983	-		Dshi_3111	0.31	-1.5
3,278,019	-		Dshi_3111	0.33	-2.5
3,278,089	+		Dshi_3111	0.37	-0.5