Experiment: m.b. benzoic 0.32 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_3052 and Dshi_3053 are separated by 435 nucleotides Dshi_3053 and Dshi_3054 are separated by 283 nucleotides
Dshi_3052: Dshi_3052 - hypothetical protein (RefSeq), at 3,220,290 to 3,220,997
_3052
Dshi_3053: Dshi_3053 - transposase, putative (RefSeq), at 3,221,433 to 3,222,143
_3053
Dshi_3054: Dshi_3054 - phospholipid/glycerol acyltransferase (RefSeq), at 3,222,427 to 3,223,182
_3054
Position (kb)
3221
3222
3223 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3221.095 kb on - strand at 3221.164 kb on - strand at 3221.169 kb on + strand at 3221.176 kb on - strand at 3221.193 kb on + strand at 3221.193 kb on + strand at 3221.239 kb on + strand at 3221.285 kb on + strand at 3221.285 kb on + strand at 3221.285 kb on + strand at 3221.285 kb on + strand at 3221.293 kb on - strand at 3221.293 kb on - strand at 3221.293 kb on - strand at 3221.381 kb on - strand at 3221.383 kb on - strand at 3221.467 kb on + strand at 3221.475 kb on - strand at 3221.524 kb on - strand, within Dshi_3053 at 3221.537 kb on + strand, within Dshi_3053 at 3221.547 kb on + strand, within Dshi_3053 at 3221.573 kb on + strand, within Dshi_3053 at 3221.608 kb on - strand, within Dshi_3053 at 3221.682 kb on - strand, within Dshi_3053 at 3221.958 kb on - strand, within Dshi_3053 at 3221.976 kb on - strand, within Dshi_3053 at 3221.994 kb on - strand, within Dshi_3053 at 3222.029 kb on + strand, within Dshi_3053 at 3222.037 kb on - strand, within Dshi_3053 at 3222.039 kb on + strand, within Dshi_3053 at 3222.058 kb on + strand, within Dshi_3053 at 3222.072 kb on - strand, within Dshi_3053 at 3222.075 kb on + strand at 3222.203 kb on + strand at 3222.203 kb on + strand at 3222.203 kb on + strand at 3222.211 kb on - strand at 3222.211 kb on - strand at 3222.211 kb on - strand at 3222.244 kb on + strand at 3222.244 kb on + strand at 3222.251 kb on - strand at 3222.251 kb on - strand at 3222.252 kb on - strand at 3222.272 kb on + strand at 3222.272 kb on + strand at 3222.294 kb on + strand at 3222.312 kb on + strand at 3222.334 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. benzoic 0.32 mg/ml remove 3,221,095 - +0.1 3,221,164 - -1.8 3,221,169 + -2.4 3,221,176 - -0.5 3,221,193 + +0.6 3,221,193 + +0.2 3,221,239 + +0.6 3,221,285 + -1.9 3,221,285 + -1.0 3,221,285 + -0.3 3,221,285 + +1.2 3,221,293 - -0.9 3,221,293 - -1.4 3,221,293 - +1.1 3,221,381 - +0.1 3,221,383 - -0.4 3,221,467 + -3.3 3,221,475 - -1.0 3,221,524 - Dshi_3053 0.13 -1.2 3,221,537 + Dshi_3053 0.15 +1.0 3,221,547 + Dshi_3053 0.16 +1.3 3,221,573 + Dshi_3053 0.20 +0.6 3,221,608 - Dshi_3053 0.25 +0.6 3,221,682 - Dshi_3053 0.35 -0.4 3,221,958 - Dshi_3053 0.74 +0.9 3,221,976 - Dshi_3053 0.76 +2.8 3,221,994 - Dshi_3053 0.79 +0.3 3,222,029 + Dshi_3053 0.84 -0.4 3,222,037 - Dshi_3053 0.85 +0.3 3,222,039 + Dshi_3053 0.85 +2.2 3,222,058 + Dshi_3053 0.88 -0.4 3,222,072 - Dshi_3053 0.90 -0.1 3,222,075 + -1.4 3,222,203 + +0.6 3,222,203 + +1.1 3,222,203 + -1.9 3,222,211 - -1.7 3,222,211 - -1.4 3,222,211 - +0.3 3,222,244 + +2.6 3,222,244 + +0.2 3,222,251 - -0.4 3,222,251 - -1.2 3,222,252 - +0.6 3,222,272 + -2.2 3,222,272 + +1.6 3,222,294 + +1.6 3,222,312 + -2.9 3,222,334 + -0.6
Or see this region's nucleotide sequence