Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_2998
Experiment: m.b. benzoic 0.32 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. benzoic 0.32 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,162,183 | + | +0.6 | |||
3,162,213 | + | +0.1 | |||
3,162,276 | - | -1.4 | |||
3,162,530 | - | +0.9 | |||
3,162,640 | + | Dshi_2998 | 0.12 | +0.1 | |
3,162,698 | + | Dshi_2998 | 0.15 | +1.6 | |
3,162,771 | - | Dshi_2998 | 0.18 | +0.6 | |
3,163,006 | + | Dshi_2998 | 0.27 | +0.4 | |
3,163,094 | - | Dshi_2998 | 0.31 | -0.6 | |
3,163,128 | - | Dshi_2998 | 0.32 | -1.6 | |
3,163,205 | + | Dshi_2998 | 0.35 | +0.8 | |
3,163,477 | + | Dshi_2998 | 0.46 | -0.9 | |
3,163,490 | - | Dshi_2998 | 0.47 | -1.6 | |
3,163,569 | - | Dshi_2998 | 0.50 | +2.2 | |
3,163,609 | - | Dshi_2998 | 0.51 | +0.6 | |
3,163,738 | + | Dshi_2998 | 0.57 | +2.2 | |
3,164,249 | - | Dshi_2998 | 0.77 | -0.4 | |
3,164,253 | - | Dshi_2998 | 0.77 | +0.6 | |
3,164,268 | - | Dshi_2998 | 0.78 | -0.2 | |
3,164,392 | + | Dshi_2998 | 0.83 | -0.2 | |
3,164,399 | - | Dshi_2998 | 0.83 | +2.6 | |
3,164,521 | + | Dshi_2998 | 0.88 | -0.6 | |
3,164,707 | + | -2.1 | |||
3,164,817 | - | -3.7 | |||
3,164,824 | + | -0.2 | |||
3,164,842 | + | -1.4 | |||
3,165,468 | - | Dshi_2999 | 0.34 | +0.6 | |
3,165,699 | + | Dshi_2999 | 0.49 | +1.6 |
Or see this region's nucleotide sequence