Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_2828
Experiment: m.b. benzoic 0.32 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. benzoic 0.32 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,983,100 | - | -0.5 | |||
2,983,102 | + | -0.8 | |||
2,983,110 | - | +0.7 | |||
2,983,317 | + | +0.7 | |||
2,983,325 | - | Dshi_2827 | 0.38 | +0.1 | |
2,983,382 | - | Dshi_2827 | 0.48 | -0.9 | |
2,983,538 | + | Dshi_2827 | 0.76 | +2.7 | |
2,983,570 | + | Dshi_2827 | 0.81 | +1.7 | |
2,983,601 | - | Dshi_2827 | 0.87 | -1.6 | |
2,983,608 | + | Dshi_2827 | 0.88 | -1.3 | |
2,983,737 | + | -1.0 | |||
2,983,756 | - | +0.7 | |||
2,983,969 | - | Dshi_2828 | 0.13 | -1.1 | |
2,983,976 | + | Dshi_2828 | 0.14 | +0.7 | |
2,984,312 | - | Dshi_2828 | 0.36 | -0.3 | |
2,984,477 | + | Dshi_2828 | 0.47 | -0.3 | |
2,984,582 | + | Dshi_2828 | 0.54 | +1.7 | |
2,984,710 | - | Dshi_2828 | 0.62 | -0.6 | |
2,984,714 | - | Dshi_2828 | 0.62 | -2.7 | |
2,984,758 | - | Dshi_2828 | 0.65 | -0.3 | |
2,984,893 | + | Dshi_2828 | 0.74 | +2.1 | |
2,984,997 | - | Dshi_2828 | 0.81 | +1.7 | |
2,985,063 | + | Dshi_2828 | 0.85 | -0.9 | |
2,985,086 | - | Dshi_2828 | 0.87 | +3.5 | |
2,985,148 | - | +3.2 | |||
2,985,174 | + | -0.5 | |||
2,985,200 | + | +2.2 | |||
2,985,209 | + | -0.5 | |||
2,985,315 | + | -0.7 | |||
2,986,144 | - | +0.4 | |||
2,986,208 | - | -2.3 |
Or see this region's nucleotide sequence