Experiment: m.b. benzoic 0.32 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_2792 and Dshi_2793 overlap by 4 nucleotides Dshi_2793 and Dshi_2794 are separated by 22 nucleotides Dshi_2794 and Dshi_2795 are separated by 6 nucleotides
Dshi_2792: Dshi_2792 - toxic anion resistance family protein (RefSeq), at 2,950,980 to 2,952,173
_2792
Dshi_2793: Dshi_2793 - lipoprotein, putative (RefSeq), at 2,952,170 to 2,953,117
_2793
Dshi_2794: Dshi_2794 - hypothetical protein (RefSeq), at 2,953,140 to 2,954,270
_2794
Dshi_2795: Dshi_2795 - hypothetical protein (RefSeq), at 2,954,277 to 2,955,392
_2795
Position (kb)
2953
2954
2955 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 2952.147 kb on + strand at 2952.470 kb on - strand, within Dshi_2793 at 2952.470 kb on - strand, within Dshi_2793 at 2952.581 kb on + strand, within Dshi_2793 at 2952.581 kb on + strand, within Dshi_2793 at 2952.581 kb on + strand, within Dshi_2793 at 2952.589 kb on - strand, within Dshi_2793 at 2952.589 kb on - strand, within Dshi_2793 at 2952.667 kb on + strand, within Dshi_2793 at 2952.817 kb on - strand, within Dshi_2793 at 2952.833 kb on + strand, within Dshi_2793 at 2952.918 kb on + strand, within Dshi_2793 at 2952.947 kb on - strand, within Dshi_2793 at 2952.960 kb on - strand, within Dshi_2793 at 2953.089 kb on + strand at 2953.121 kb on - strand at 2953.260 kb on + strand, within Dshi_2794 at 2953.365 kb on + strand, within Dshi_2794 at 2953.377 kb on + strand, within Dshi_2794 at 2953.445 kb on + strand, within Dshi_2794 at 2953.517 kb on - strand, within Dshi_2794 at 2953.542 kb on - strand, within Dshi_2794 at 2953.605 kb on + strand, within Dshi_2794 at 2953.712 kb on + strand, within Dshi_2794 at 2953.826 kb on - strand, within Dshi_2794 at 2953.842 kb on + strand, within Dshi_2794 at 2954.048 kb on + strand, within Dshi_2794 at 2954.233 kb on - strand at 2954.352 kb on + strand at 2954.444 kb on - strand, within Dshi_2795 at 2954.456 kb on + strand, within Dshi_2795 at 2954.510 kb on + strand, within Dshi_2795 at 2954.511 kb on + strand, within Dshi_2795 at 2954.636 kb on + strand, within Dshi_2795 at 2954.655 kb on - strand, within Dshi_2795 at 2954.678 kb on + strand, within Dshi_2795 at 2954.702 kb on + strand, within Dshi_2795 at 2954.710 kb on - strand, within Dshi_2795 at 2954.715 kb on + strand, within Dshi_2795 at 2954.774 kb on + strand, within Dshi_2795 at 2954.775 kb on + strand, within Dshi_2795 at 2954.831 kb on + strand, within Dshi_2795 at 2954.868 kb on - strand, within Dshi_2795 at 2954.906 kb on + strand, within Dshi_2795 at 2955.033 kb on - strand, within Dshi_2795 at 2955.052 kb on - strand, within Dshi_2795 at 2955.052 kb on - strand, within Dshi_2795 at 2955.056 kb on + strand, within Dshi_2795 at 2955.072 kb on - strand, within Dshi_2795 at 2955.196 kb on + strand, within Dshi_2795
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. benzoic 0.32 mg/ml remove 2,952,147 + +0.7 2,952,470 - Dshi_2793 0.32 -0.3 2,952,470 - Dshi_2793 0.32 +0.7 2,952,581 + Dshi_2793 0.43 -0.5 2,952,581 + Dshi_2793 0.43 -2.0 2,952,581 + Dshi_2793 0.43 +0.7 2,952,589 - Dshi_2793 0.44 -1.1 2,952,589 - Dshi_2793 0.44 +0.1 2,952,667 + Dshi_2793 0.52 +1.2 2,952,817 - Dshi_2793 0.68 -0.3 2,952,833 + Dshi_2793 0.70 -1.8 2,952,918 + Dshi_2793 0.79 -0.3 2,952,947 - Dshi_2793 0.82 +0.7 2,952,960 - Dshi_2793 0.83 -0.3 2,953,089 + -3.9 2,953,121 - -0.3 2,953,260 + Dshi_2794 0.11 -2.1 2,953,365 + Dshi_2794 0.20 -0.9 2,953,377 + Dshi_2794 0.21 -3.9 2,953,445 + Dshi_2794 0.27 -0.1 2,953,517 - Dshi_2794 0.33 +1.4 2,953,542 - Dshi_2794 0.36 -0.6 2,953,605 + Dshi_2794 0.41 +1.7 2,953,712 + Dshi_2794 0.51 +1.7 2,953,826 - Dshi_2794 0.61 +1.4 2,953,842 + Dshi_2794 0.62 +1.7 2,954,048 + Dshi_2794 0.80 -1.3 2,954,233 - -1.3 2,954,352 + +0.2 2,954,444 - Dshi_2795 0.15 -1.7 2,954,456 + Dshi_2795 0.16 -1.2 2,954,510 + Dshi_2795 0.21 -0.1 2,954,511 + Dshi_2795 0.21 +0.7 2,954,636 + Dshi_2795 0.32 -2.7 2,954,655 - Dshi_2795 0.34 +1.8 2,954,678 + Dshi_2795 0.36 -1.1 2,954,702 + Dshi_2795 0.38 +0.5 2,954,710 - Dshi_2795 0.39 +0.7 2,954,715 + Dshi_2795 0.39 -0.5 2,954,774 + Dshi_2795 0.45 -1.2 2,954,775 + Dshi_2795 0.45 -1.7 2,954,831 + Dshi_2795 0.50 -0.3 2,954,868 - Dshi_2795 0.53 +1.7 2,954,906 + Dshi_2795 0.56 +0.7 2,955,033 - Dshi_2795 0.68 -2.0 2,955,052 - Dshi_2795 0.69 +0.0 2,955,052 - Dshi_2795 0.69 +0.7 2,955,056 + Dshi_2795 0.70 +0.7 2,955,072 - Dshi_2795 0.71 -2.3 2,955,196 + Dshi_2795 0.82 +1.7
Or see this region's nucleotide sequence