Experiment: m.b. benzoic 0.32 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_2699 and Dshi_2700 are separated by 476 nucleotides Dshi_2700 and Dshi_2701 overlap by 1 nucleotides Dshi_2701 and Dshi_2702 overlap by 4 nucleotides
Dshi_2699: Dshi_2699 - ABC transporter related (RefSeq), at 2,859,820 to 2,860,515
_2699
Dshi_2700: Dshi_2700 - haloacid dehalogenase, type II (RefSeq), at 2,860,992 to 2,861,681
_2700
Dshi_2701: Dshi_2701 - alpha/beta hydrolase fold (RefSeq), at 2,861,681 to 2,862,505
_2701
Dshi_2702: Dshi_2702 - Pyridoxal-5'-phosphate-dependent protein beta subunit (RefSeq), at 2,862,502 to 2,863,494
_2702
Position (kb)
2860
2861
2862 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2860.162 kb on + strand, within Dshi_2699 at 2860.311 kb on - strand, within Dshi_2699 at 2860.406 kb on + strand, within Dshi_2699 at 2860.489 kb on - strand at 2860.570 kb on + strand at 2860.678 kb on + strand at 2860.835 kb on + strand at 2860.901 kb on - strand at 2860.934 kb on + strand at 2860.990 kb on - strand at 2861.275 kb on + strand, within Dshi_2700 at 2861.290 kb on - strand, within Dshi_2700 at 2861.293 kb on + strand, within Dshi_2700 at 2861.362 kb on - strand, within Dshi_2700 at 2861.422 kb on - strand, within Dshi_2700 at 2861.469 kb on + strand, within Dshi_2700 at 2861.590 kb on + strand, within Dshi_2700 at 2861.814 kb on + strand, within Dshi_2701 at 2861.836 kb on + strand, within Dshi_2701 at 2861.883 kb on - strand, within Dshi_2701 at 2861.883 kb on - strand, within Dshi_2701 at 2861.958 kb on - strand, within Dshi_2701 at 2862.052 kb on + strand, within Dshi_2701 at 2862.053 kb on - strand, within Dshi_2701 at 2862.121 kb on + strand, within Dshi_2701 at 2862.265 kb on + strand, within Dshi_2701 at 2862.289 kb on + strand, within Dshi_2701 at 2862.576 kb on + strand at 2862.580 kb on - strand at 2862.632 kb on - strand, within Dshi_2702
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. benzoic 0.32 mg/ml remove 2,860,162 + Dshi_2699 0.49 -0.5 2,860,311 - Dshi_2699 0.71 +0.3 2,860,406 + Dshi_2699 0.84 -1.3 2,860,489 - +2.2 2,860,570 + +1.2 2,860,678 + +1.0 2,860,835 + -1.4 2,860,901 - +1.6 2,860,934 + +3.4 2,860,990 - +3.2 2,861,275 + Dshi_2700 0.41 +1.0 2,861,290 - Dshi_2700 0.43 +0.0 2,861,293 + Dshi_2700 0.44 +0.6 2,861,362 - Dshi_2700 0.54 -0.5 2,861,422 - Dshi_2700 0.62 +1.2 2,861,469 + Dshi_2700 0.69 -1.8 2,861,590 + Dshi_2700 0.87 -1.6 2,861,814 + Dshi_2701 0.16 -0.3 2,861,836 + Dshi_2701 0.19 -0.7 2,861,883 - Dshi_2701 0.24 -2.4 2,861,883 - Dshi_2701 0.24 -2.6 2,861,958 - Dshi_2701 0.34 -0.6 2,862,052 + Dshi_2701 0.45 -0.4 2,862,053 - Dshi_2701 0.45 -0.6 2,862,121 + Dshi_2701 0.53 +1.6 2,862,265 + Dshi_2701 0.71 -0.2 2,862,289 + Dshi_2701 0.74 -1.0 2,862,576 + -1.7 2,862,580 - +0.5 2,862,632 - Dshi_2702 0.13 -0.8
Or see this region's nucleotide sequence