Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_2407
Experiment: m.b. benzoic 0.32 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. benzoic 0.32 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,544,887 | + | -2.2 | |||
2,544,895 | - | +1.3 | |||
2,544,895 | - | -0.8 | |||
2,544,895 | - | -1.7 | |||
2,544,895 | - | -0.1 | |||
2,544,942 | - | +0.3 | |||
2,545,177 | - | Dshi_2407 | 0.36 | -0.9 | |
2,545,225 | + | Dshi_2407 | 0.43 | +0.7 | |
2,545,228 | - | Dshi_2407 | 0.43 | -0.5 | |
2,545,247 | + | Dshi_2407 | 0.46 | +1.3 | |
2,545,398 | - | Dshi_2407 | 0.67 | -2.1 | |
2,545,501 | + | Dshi_2407 | 0.81 | +0.3 | |
2,545,501 | + | Dshi_2407 | 0.81 | +0.3 | |
2,545,511 | + | Dshi_2407 | 0.83 | -3.0 | |
2,545,543 | + | Dshi_2407 | 0.87 | -0.7 | |
2,545,543 | + | Dshi_2407 | 0.87 | -2.5 | |
2,545,543 | + | Dshi_2407 | 0.87 | -2.3 | |
2,545,548 | + | Dshi_2407 | 0.88 | +0.7 | |
2,545,669 | - | -1.0 | |||
2,545,767 | - | -0.7 | |||
2,545,823 | + | +0.3 | |||
2,545,836 | + | +0.3 | |||
2,546,043 | - | -2.0 | |||
2,546,217 | + | -1.7 | |||
2,546,217 | + | -3.5 | |||
2,546,225 | + | -0.3 | |||
2,546,261 | - | -1.3 | |||
2,546,527 | - | +0.3 |
Or see this region's nucleotide sequence