Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_2179
Experiment: m.b. benzoic 0.32 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. benzoic 0.32 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,305,663 | + | Dshi_2178 | 0.64 | -1.3 | |
2,305,681 | - | Dshi_2178 | 0.65 | -0.9 | |
2,305,710 | - | Dshi_2178 | 0.67 | -0.2 | |
2,305,784 | + | Dshi_2178 | 0.73 | +0.5 | |
2,305,849 | + | Dshi_2178 | 0.77 | -0.2 | |
2,305,911 | - | Dshi_2178 | 0.82 | -2.1 | |
2,305,919 | - | Dshi_2178 | 0.83 | -0.8 | |
2,306,025 | + | -0.7 | |||
2,306,049 | - | -3.0 | |||
2,306,115 | - | +1.5 | |||
2,306,156 | + | -0.7 | |||
2,306,156 | + | +2.8 | |||
2,306,164 | - | -1.1 | |||
2,306,164 | - | +0.3 | |||
2,306,164 | - | -0.7 | |||
2,306,164 | - | +2.3 | |||
2,306,165 | - | +0.8 | |||
2,306,175 | - | +1.3 | |||
2,306,289 | - | -1.6 | |||
2,306,332 | + | -0.5 | |||
2,306,413 | + | -2.9 | |||
2,306,421 | + | -0.8 | |||
2,306,483 | + | -0.0 | |||
2,306,491 | - | +0.7 | |||
2,307,752 | + | -0.9 |
Or see this region's nucleotide sequence