Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_2063
Experiment: m.b. benzoic 0.32 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. benzoic 0.32 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,184,086 | - | Dshi_2062 | 0.57 | +4.6 | |
2,184,215 | - | Dshi_2062 | 0.63 | +1.4 | |
2,184,281 | - | Dshi_2062 | 0.66 | +2.8 | |
2,184,505 | - | Dshi_2062 | 0.75 | +1.8 | |
2,184,618 | - | Dshi_2062 | 0.81 | +2.6 | |
2,185,107 | - | -0.6 | |||
2,185,173 | - | Dshi_2063 | 0.16 | -0.3 | |
2,185,173 | - | Dshi_2063 | 0.16 | -0.7 | |
2,185,192 | + | Dshi_2063 | 0.19 | +0.0 | |
2,185,200 | - | Dshi_2063 | 0.20 | -1.3 | |
2,185,292 | + | Dshi_2063 | 0.32 | -1.3 | |
2,185,697 | - | Dshi_2063 | 0.85 | +0.3 | |
2,185,730 | + | Dshi_2063 | 0.90 | +1.6 | |
2,185,792 | - | +0.1 | |||
2,186,373 | + | -1.2 | |||
2,186,417 | - | -1.7 | |||
2,186,677 | + | Dshi_2065 | 0.43 | +1.3 | |
2,186,683 | - | Dshi_2065 | 0.44 | -0.8 | |
2,186,714 | + | Dshi_2065 | 0.49 | +0.3 |
Or see this region's nucleotide sequence