Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_1812
Experiment: m.b. benzoic 0.32 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. benzoic 0.32 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,888,412 | + | Dshi_1811 | 0.61 | -1.2 | |
1,888,916 | + | -1.5 | |||
1,888,921 | + | +2.3 | |||
1,889,047 | + | -1.2 | |||
1,889,111 | - | Dshi_1812 | 0.15 | -2.0 | |
1,889,119 | - | Dshi_1812 | 0.16 | -0.4 | |
1,889,438 | - | Dshi_1812 | 0.70 | +0.2 | |
1,889,540 | - | Dshi_1812 | 0.87 | +1.3 | |
1,889,600 | + | +0.8 | |||
1,889,622 | - | +2.3 | |||
1,889,892 | - | Dshi_1813 | 0.16 | -0.1 | |
1,889,925 | + | Dshi_1813 | 0.18 | -0.4 | |
1,890,063 | + | Dshi_1813 | 0.29 | -0.6 | |
1,890,278 | - | Dshi_1813 | 0.46 | -0.3 | |
1,890,321 | + | Dshi_1813 | 0.49 | +0.3 | |
1,890,531 | + | Dshi_1813 | 0.65 | -1.0 | |
1,890,539 | - | Dshi_1813 | 0.66 | -0.3 | |
1,890,560 | + | Dshi_1813 | 0.67 | -1.6 | |
1,890,573 | - | Dshi_1813 | 0.68 | -1.6 | |
1,890,591 | - | Dshi_1813 | 0.70 | +3.1 | |
1,890,607 | - | Dshi_1813 | 0.71 | +1.9 |
Or see this region's nucleotide sequence