Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_1489
Experiment: m.b. benzoic 0.32 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. benzoic 0.32 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,546,770 | + | Dshi_1488 | 0.16 | -0.6 | |
1,546,780 | + | Dshi_1488 | 0.17 | -1.6 | |
1,547,052 | - | Dshi_1488 | 0.40 | -1.2 | |
1,547,473 | - | Dshi_1488 | 0.77 | -0.6 | |
1,547,664 | - | +3.0 | |||
1,547,942 | - | Dshi_1489 | 0.17 | +0.3 | |
1,548,048 | - | Dshi_1489 | 0.27 | -1.7 | |
1,548,048 | - | Dshi_1489 | 0.27 | -1.7 | |
1,548,097 | + | Dshi_1489 | 0.31 | -1.0 | |
1,548,152 | + | Dshi_1489 | 0.36 | -0.9 | |
1,548,199 | + | Dshi_1489 | 0.41 | -1.1 | |
1,548,618 | + | Dshi_1489 | 0.79 | -0.0 | |
1,548,809 | - | -0.8 | |||
1,549,088 | + | -1.2 | |||
1,549,557 | + | Dshi_1490 | 0.37 | -1.0 | |
1,549,581 | + | Dshi_1490 | 0.38 | -0.4 | |
1,549,617 | + | Dshi_1490 | 0.41 | -1.2 |
Or see this region's nucleotide sequence