Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_1106
Experiment: m.b. benzoic 0.32 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. benzoic 0.32 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,131,937 | - | Dshi_1105 | 0.72 | +1.3 | |
1,132,198 | + | -2.0 | |||
1,132,289 | + | -0.1 | |||
1,132,290 | + | -0.2 | |||
1,132,297 | - | -1.7 | |||
1,132,298 | - | +2.7 | |||
1,132,298 | - | -0.8 | |||
1,132,298 | - | +1.3 | |||
1,132,353 | + | -0.5 | |||
1,132,374 | + | +1.9 | |||
1,132,431 | - | Dshi_1106 | 0.20 | +1.0 | |
1,132,594 | + | Dshi_1106 | 0.46 | -0.7 | |
1,132,770 | + | Dshi_1106 | 0.74 | +3.5 | |
1,132,798 | + | Dshi_1106 | 0.79 | +0.1 | |
1,133,018 | + | Dshi_1107 | 0.22 | -1.2 | |
1,133,038 | - | Dshi_1107 | 0.27 | -0.9 | |
1,133,091 | - | Dshi_1107 | 0.40 | +0.9 | |
1,133,148 | + | Dshi_1107 | 0.54 | -0.6 | |
1,133,219 | + | Dshi_1107 | 0.71 | +2.3 | |
1,133,278 | - | Dshi_1107 | 0.85 | -0.2 | |
1,133,316 | - | -1.0 | |||
1,133,422 | - | -0.1 | |||
1,133,432 | - | -1.2 |
Or see this region's nucleotide sequence