Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_1055

Experiment: m.b. benzoic 0.32 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. benzoic 0.32 mg/ml
1,087,641	+				-0.9
1,087,697	-				-0.9
1,087,795	+				-0.3
1,087,951	-		Dshi_1054	0.27	+1.3
1,087,991	+		Dshi_1054	0.32	+0.0
1,088,151	+		Dshi_1054	0.50	+3.1
1,088,166	+		Dshi_1054	0.51	-0.2
1,088,234	-		Dshi_1054	0.59	-2.5
1,088,251	+		Dshi_1054	0.61	+0.2
1,088,259	-		Dshi_1054	0.62	-0.5
1,088,320	-		Dshi_1054	0.69	-1.5
1,088,327	+		Dshi_1054	0.69	-1.7
1,088,382	+		Dshi_1054	0.76	+0.5
1,088,400	-		Dshi_1054	0.78	-0.9
1,088,467	-		Dshi_1054	0.85	+0.0
1,088,536	+				-0.9
1,088,557	-				-1.8
1,088,557	-				+0.3
1,088,557	-				+0.4
1,088,557	-				+0.0
1,088,569	+				+0.3
1,088,569	+				+1.5
1,088,569	+				+1.6
1,088,569	+				+0.6
1,088,569	+				-0.2
1,088,577	-				-0.1
1,088,577	-				-0.9
1,088,577	-				-1.6
1,088,577	-				-2.6
1,088,577	-				-0.4
1,088,626	-				+0.6
1,088,656	+				-1.0
1,088,715	-				-2.5
1,088,722	-		Dshi_1055	0.10	+2.2
1,088,800	+		Dshi_1055	0.17	+0.1
1,088,854	+		Dshi_1055	0.22	+1.3
1,088,891	+		Dshi_1055	0.26	-0.7
1,088,995	-		Dshi_1055	0.35	+0.2
1,089,014	-		Dshi_1055	0.37	+0.3
1,089,024	+		Dshi_1055	0.38	-0.8
1,089,134	-		Dshi_1055	0.48	+1.3
1,089,175	-		Dshi_1055	0.51	+0.1
1,089,228	+		Dshi_1055	0.56	-1.0
1,089,350	-		Dshi_1055	0.67	-0.3
1,089,368	-		Dshi_1055	0.69	+2.2
1,089,438	+		Dshi_1055	0.75	-0.7
1,089,472	-		Dshi_1055	0.78	-1.7
1,089,496	-		Dshi_1055	0.81	-2.2
1,089,554	+		Dshi_1055	0.86	-0.9
1,089,562	-		Dshi_1055	0.87	-0.7
1,089,582	-		Dshi_1055	0.88	-0.9
1,089,636	-				-0.5
1,089,657	-				-0.5
1,089,870	+		Dshi_1056	0.17	-0.2
1,089,892	+		Dshi_1056	0.19	+1.9
1,090,061	-		Dshi_1056	0.38	-1.1
1,090,123	-		Dshi_1056	0.44	+0.0
1,090,183	+		Dshi_1056	0.51	+2.7
1,090,183	+		Dshi_1056	0.51	-0.5
1,090,275	+		Dshi_1056	0.61	-1.5
1,090,313	+		Dshi_1056	0.65	-0.7
1,090,321	-		Dshi_1056	0.66	+1.9
1,090,336	-		Dshi_1056	0.68	-0.8
1,090,361	-		Dshi_1056	0.71	-0.7
1,090,407	-		Dshi_1056	0.76	-0.3
1,090,409	-		Dshi_1056	0.76	-1.9
1,090,437	-		Dshi_1056	0.79	-1.2
1,090,474	+		Dshi_1056	0.83	-0.6
1,090,553	-				-0.7