Experiment: m.b. benzoic 0.32 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0786 and Dshi_0787 are separated by 49 nucleotides Dshi_0787 and Dshi_0788 are separated by 96 nucleotides Dshi_0788 and Dshi_0789 are separated by 3 nucleotides
Dshi_0786: Dshi_0786 - transcriptional regulator, CarD family (RefSeq), at 791,654 to 792,166
_0786
Dshi_0787: Dshi_0787 - cobalamin-5-phosphate synthase CobS (RefSeq), at 792,216 to 792,992
_0787
Dshi_0788: Dshi_0788 - Nicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferase (RefSeq), at 793,089 to 794,126
_0788
Dshi_0789: Dshi_0789 - potassium efflux system protein (RefSeq), at 794,130 to 796,142
_0789
Position (kb) 793
794
795 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 794.122 kb on + strand at 794.372 kb on - strand, within Dshi_0789 at 794.487 kb on - strand, within Dshi_0789 at 794.576 kb on + strand, within Dshi_0789 at 794.581 kb on + strand, within Dshi_0789 at 794.637 kb on - strand, within Dshi_0789 at 794.646 kb on - strand, within Dshi_0789 at 794.647 kb on - strand, within Dshi_0789 at 794.656 kb on - strand, within Dshi_0789 at 794.962 kb on - strand, within Dshi_0789 at 794.977 kb on - strand, within Dshi_0789 at 794.987 kb on - strand, within Dshi_0789 at 795.059 kb on + strand, within Dshi_0789 at 795.085 kb on + strand, within Dshi_0789 at 795.097 kb on + strand, within Dshi_0789 at 795.101 kb on + strand, within Dshi_0789
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. benzoic 0.32 mg/ml remove 794,122 + +0.5 794,372 - Dshi_0789 0.12 -1.8 794,487 - Dshi_0789 0.18 +2.5 794,576 + Dshi_0789 0.22 +0.5 794,581 + Dshi_0789 0.22 -3.4 794,637 - Dshi_0789 0.25 -2.5 794,646 - Dshi_0789 0.26 -0.3 794,647 - Dshi_0789 0.26 +0.5 794,656 - Dshi_0789 0.26 -0.3 794,962 - Dshi_0789 0.41 -1.4 794,977 - Dshi_0789 0.42 +0.5 794,987 - Dshi_0789 0.43 -1.6 795,059 + Dshi_0789 0.46 -1.3 795,085 + Dshi_0789 0.47 +1.1 795,097 + Dshi_0789 0.48 -0.3 795,101 + Dshi_0789 0.48 -0.8
Or see this region's nucleotide sequence