Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_0776
Experiment: m.b. benzoic 0.32 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. benzoic 0.32 mg/ml |
---|---|---|---|---|---|
remove | |||||
780,401 | - | Dshi_0775 | 0.34 | +0.5 | |
780,418 | - | Dshi_0775 | 0.35 | +2.9 | |
780,459 | - | Dshi_0775 | 0.39 | +0.2 | |
780,510 | - | Dshi_0775 | 0.44 | -0.6 | |
780,638 | + | Dshi_0775 | 0.56 | +1.5 | |
780,638 | - | Dshi_0775 | 0.56 | -1.5 | |
780,745 | + | Dshi_0775 | 0.66 | -0.6 | |
780,781 | - | Dshi_0775 | 0.69 | +2.5 | |
780,794 | + | Dshi_0775 | 0.70 | -1.0 | |
780,938 | + | Dshi_0775 | 0.84 | -0.5 | |
780,943 | + | Dshi_0775 | 0.84 | +0.5 | |
780,946 | - | Dshi_0775 | 0.84 | -0.9 | |
781,007 | + | Dshi_0775 | 0.90 | +0.5 | |
781,026 | + | +1.3 | |||
781,081 | - | +0.1 | |||
781,395 | + | -0.3 | |||
781,569 | + | Dshi_0776 | 0.22 | +3.5 | |
781,645 | - | Dshi_0776 | 0.32 | -2.6 | |
781,709 | + | Dshi_0776 | 0.40 | -0.3 | |
782,003 | - | Dshi_0776 | 0.77 | -0.3 | |
782,113 | - | -0.8 | |||
782,190 | + | -0.5 |
Or see this region's nucleotide sequence