Experiment: m.b. benzoic 0.32 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0481 and Dshi_0482 are separated by 467 nucleotides Dshi_0482 and Dshi_0483 are separated by 158 nucleotides
Dshi_0481: Dshi_0481 - hypothetical protein (RefSeq), at 466,019 to 466,831
_0481
Dshi_0482: Dshi_0482 - hypothetical protein (RefSeq), at 467,299 to 467,784
_0482
Dshi_0483: Dshi_0483 - hypothetical protein (RefSeq), at 467,943 to 469,130
_0483
Position (kb) 467
468 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3
4 at 466.331 kb on + strand, within Dshi_0481 at 466.334 kb on - strand, within Dshi_0481 at 466.351 kb on - strand, within Dshi_0481 at 466.433 kb on - strand, within Dshi_0481 at 466.486 kb on - strand, within Dshi_0481 at 466.583 kb on - strand, within Dshi_0481 at 466.583 kb on - strand, within Dshi_0481 at 466.583 kb on - strand, within Dshi_0481 at 466.637 kb on + strand, within Dshi_0481 at 466.637 kb on + strand, within Dshi_0481 at 466.674 kb on - strand, within Dshi_0481 at 466.702 kb on + strand, within Dshi_0481 at 466.702 kb on + strand, within Dshi_0481 at 466.703 kb on - strand, within Dshi_0481 at 466.710 kb on - strand, within Dshi_0481 at 466.710 kb on - strand, within Dshi_0481 at 466.731 kb on + strand, within Dshi_0481 at 466.743 kb on + strand, within Dshi_0481 at 466.743 kb on + strand, within Dshi_0481 at 466.743 kb on + strand, within Dshi_0481 at 466.743 kb on + strand, within Dshi_0481 at 466.743 kb on + strand, within Dshi_0481 at 466.743 kb on + strand, within Dshi_0481 at 466.743 kb on + strand, within Dshi_0481 at 466.743 kb on + strand, within Dshi_0481 at 466.743 kb on + strand, within Dshi_0481 at 466.743 kb on + strand, within Dshi_0481 at 466.751 kb on - strand at 466.751 kb on - strand at 466.751 kb on - strand at 466.751 kb on - strand at 466.763 kb on - strand at 466.763 kb on - strand at 466.786 kb on + strand at 466.799 kb on - strand at 466.799 kb on - strand at 466.819 kb on - strand at 466.854 kb on + strand at 466.856 kb on + strand at 466.864 kb on - strand at 466.891 kb on + strand at 466.894 kb on - strand at 466.963 kb on + strand at 466.963 kb on + strand at 466.963 kb on + strand at 466.963 kb on + strand at 466.971 kb on - strand at 466.971 kb on - strand at 466.971 kb on - strand at 466.986 kb on + strand at 467.017 kb on + strand at 467.025 kb on - strand at 467.025 kb on - strand at 467.045 kb on + strand at 467.059 kb on + strand at 467.159 kb on + strand at 467.169 kb on + strand at 467.169 kb on + strand at 467.169 kb on + strand at 467.169 kb on + strand at 467.169 kb on + strand at 467.177 kb on - strand at 467.177 kb on - strand at 467.211 kb on - strand at 467.217 kb on - strand at 467.252 kb on + strand at 467.252 kb on + strand at 467.253 kb on + strand at 467.253 kb on + strand at 467.271 kb on + strand at 467.271 kb on + strand at 467.286 kb on + strand at 467.294 kb on - strand at 467.334 kb on - strand at 467.346 kb on + strand at 467.351 kb on + strand, within Dshi_0482 at 467.354 kb on - strand, within Dshi_0482 at 467.356 kb on + strand, within Dshi_0482 at 467.356 kb on + strand, within Dshi_0482 at 467.356 kb on + strand, within Dshi_0482 at 467.361 kb on + strand, within Dshi_0482 at 467.364 kb on - strand, within Dshi_0482 at 467.393 kb on + strand, within Dshi_0482 at 467.393 kb on + strand, within Dshi_0482 at 467.393 kb on + strand, within Dshi_0482 at 467.393 kb on + strand, within Dshi_0482 at 467.393 kb on + strand, within Dshi_0482 at 467.401 kb on - strand, within Dshi_0482 at 467.401 kb on - strand, within Dshi_0482 at 467.401 kb on - strand, within Dshi_0482 at 467.401 kb on - strand, within Dshi_0482 at 467.401 kb on - strand, within Dshi_0482 at 467.401 kb on - strand, within Dshi_0482 at 467.403 kb on + strand, within Dshi_0482 at 467.411 kb on - strand, within Dshi_0482 at 467.411 kb on - strand, within Dshi_0482 at 467.427 kb on + strand, within Dshi_0482 at 467.427 kb on + strand, within Dshi_0482 at 467.427 kb on + strand, within Dshi_0482 at 467.435 kb on - strand, within Dshi_0482 at 467.435 kb on - strand, within Dshi_0482 at 467.435 kb on - strand, within Dshi_0482 at 467.452 kb on + strand, within Dshi_0482 at 467.453 kb on - strand, within Dshi_0482 at 467.482 kb on + strand, within Dshi_0482 at 467.482 kb on + strand, within Dshi_0482 at 467.482 kb on + strand, within Dshi_0482 at 467.482 kb on + strand, within Dshi_0482 at 467.490 kb on - strand, within Dshi_0482 at 467.495 kb on + strand, within Dshi_0482 at 467.495 kb on + strand, within Dshi_0482 at 467.500 kb on + strand, within Dshi_0482 at 467.587 kb on - strand, within Dshi_0482 at 467.589 kb on + strand, within Dshi_0482 at 467.589 kb on + strand, within Dshi_0482 at 467.597 kb on + strand, within Dshi_0482 at 467.597 kb on - strand, within Dshi_0482 at 467.597 kb on - strand, within Dshi_0482 at 467.597 kb on - strand, within Dshi_0482 at 467.603 kb on + strand, within Dshi_0482 at 467.634 kb on - strand, within Dshi_0482 at 467.636 kb on + strand, within Dshi_0482 at 467.659 kb on - strand, within Dshi_0482 at 467.661 kb on + strand, within Dshi_0482 at 467.670 kb on - strand, within Dshi_0482 at 467.704 kb on + strand, within Dshi_0482 at 467.704 kb on + strand, within Dshi_0482 at 467.709 kb on + strand, within Dshi_0482 at 467.711 kb on - strand, within Dshi_0482 at 467.711 kb on - strand, within Dshi_0482 at 467.717 kb on - strand, within Dshi_0482 at 467.723 kb on + strand, within Dshi_0482 at 467.723 kb on + strand, within Dshi_0482 at 467.750 kb on + strand at 467.758 kb on - strand at 467.758 kb on - strand at 467.820 kb on - strand at 467.835 kb on - strand at 467.835 kb on - strand at 467.835 kb on - strand at 467.835 kb on - strand at 467.850 kb on + strand at 467.858 kb on - strand at 467.864 kb on + strand at 467.864 kb on + strand at 467.872 kb on - strand at 467.875 kb on + strand at 467.891 kb on - strand at 467.931 kb on + strand at 467.939 kb on - strand at 467.939 kb on - strand at 467.984 kb on + strand at 467.984 kb on + strand at 468.030 kb on + strand at 468.064 kb on - strand, within Dshi_0483 at 468.077 kb on + strand, within Dshi_0483 at 468.090 kb on + strand, within Dshi_0483 at 468.098 kb on - strand, within Dshi_0483 at 468.098 kb on - strand, within Dshi_0483 at 468.165 kb on - strand, within Dshi_0483 at 468.201 kb on + strand, within Dshi_0483 at 468.202 kb on - strand, within Dshi_0483 at 468.232 kb on - strand, within Dshi_0483 at 468.307 kb on - strand, within Dshi_0483 at 468.327 kb on + strand, within Dshi_0483 at 468.351 kb on + strand, within Dshi_0483 at 468.371 kb on + strand, within Dshi_0483 at 468.381 kb on + strand, within Dshi_0483 at 468.381 kb on + strand, within Dshi_0483 at 468.389 kb on - strand, within Dshi_0483 at 468.389 kb on - strand, within Dshi_0483 at 468.494 kb on + strand, within Dshi_0483 at 468.525 kb on - strand, within Dshi_0483 at 468.549 kb on + strand, within Dshi_0483 at 468.598 kb on - strand, within Dshi_0483 at 468.598 kb on - strand, within Dshi_0483 at 468.619 kb on - strand, within Dshi_0483 at 468.663 kb on - strand, within Dshi_0483 at 468.668 kb on - strand, within Dshi_0483 at 468.676 kb on - strand, within Dshi_0483 at 468.698 kb on + strand, within Dshi_0483 at 468.699 kb on - strand, within Dshi_0483 at 468.699 kb on - strand, within Dshi_0483 at 468.706 kb on - strand, within Dshi_0483 at 468.741 kb on - strand, within Dshi_0483 at 468.755 kb on - strand, within Dshi_0483 at 468.757 kb on - strand, within Dshi_0483 at 468.761 kb on + strand, within Dshi_0483 at 468.762 kb on + strand, within Dshi_0483 at 468.768 kb on + strand, within Dshi_0483 at 468.770 kb on - strand, within Dshi_0483 at 468.770 kb on - strand, within Dshi_0483 at 468.778 kb on - strand, within Dshi_0483
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. benzoic 0.32 mg/ml remove 466,331 + Dshi_0481 0.38 +0.0 466,334 - Dshi_0481 0.39 +1.4 466,351 - Dshi_0481 0.41 -1.5 466,433 - Dshi_0481 0.51 +0.9 466,486 - Dshi_0481 0.57 -0.7 466,583 - Dshi_0481 0.69 -2.0 466,583 - Dshi_0481 0.69 +1.5 466,583 - Dshi_0481 0.69 +0.9 466,637 + Dshi_0481 0.76 -1.2 466,637 + Dshi_0481 0.76 +1.1 466,674 - Dshi_0481 0.81 +0.5 466,702 + Dshi_0481 0.84 -0.4 466,702 + Dshi_0481 0.84 +0.2 466,703 - Dshi_0481 0.84 +0.7 466,710 - Dshi_0481 0.85 -0.2 466,710 - Dshi_0481 0.85 -0.6 466,731 + Dshi_0481 0.88 -0.6 466,743 + Dshi_0481 0.89 +1.3 466,743 + Dshi_0481 0.89 -0.0 466,743 + Dshi_0481 0.89 +0.6 466,743 + Dshi_0481 0.89 -0.3 466,743 + Dshi_0481 0.89 -0.5 466,743 + Dshi_0481 0.89 +0.8 466,743 + Dshi_0481 0.89 -0.7 466,743 + Dshi_0481 0.89 +0.2 466,743 + Dshi_0481 0.89 -0.4 466,743 + Dshi_0481 0.89 +0.1 466,751 - -0.7 466,751 - -0.4 466,751 - -0.7 466,751 - -0.2 466,763 - +0.1 466,763 - +1.3 466,786 + +0.3 466,799 - -1.6 466,799 - +0.1 466,819 - +0.7 466,854 + +0.9 466,856 + -0.3 466,864 - -0.9 466,891 + -0.5 466,894 - -0.7 466,963 + -0.4 466,963 + -1.0 466,963 + -0.9 466,963 + +0.7 466,971 - -0.5 466,971 - -0.4 466,971 - -0.1 466,986 + +1.4 467,017 + -1.6 467,025 - -1.1 467,025 - -0.7 467,045 + +0.5 467,059 + -0.2 467,159 + -2.0 467,169 + +0.1 467,169 + -0.4 467,169 + +2.1 467,169 + -0.4 467,169 + +0.2 467,177 - +0.2 467,177 - +0.9 467,211 - +0.3 467,217 - -0.8 467,252 + +0.4 467,252 + +0.6 467,253 + -0.2 467,253 + +0.8 467,271 + -1.7 467,271 + +0.1 467,286 + -1.9 467,294 - -0.4 467,334 - -0.1 467,346 + +0.4 467,351 + Dshi_0482 0.11 -0.4 467,354 - Dshi_0482 0.11 +1.1 467,356 + Dshi_0482 0.12 -0.2 467,356 + Dshi_0482 0.12 -1.5 467,356 + Dshi_0482 0.12 -0.6 467,361 + Dshi_0482 0.13 +0.1 467,364 - Dshi_0482 0.13 -0.0 467,393 + Dshi_0482 0.19 -0.2 467,393 + Dshi_0482 0.19 -0.5 467,393 + Dshi_0482 0.19 -0.9 467,393 + Dshi_0482 0.19 -1.5 467,393 + Dshi_0482 0.19 -0.0 467,401 - Dshi_0482 0.21 -1.3 467,401 - Dshi_0482 0.21 -0.7 467,401 - Dshi_0482 0.21 +0.9 467,401 - Dshi_0482 0.21 +0.6 467,401 - Dshi_0482 0.21 +0.3 467,401 - Dshi_0482 0.21 -0.3 467,403 + Dshi_0482 0.21 -1.1 467,411 - Dshi_0482 0.23 +4.4 467,411 - Dshi_0482 0.23 +0.6 467,427 + Dshi_0482 0.26 -0.4 467,427 + Dshi_0482 0.26 +1.1 467,427 + Dshi_0482 0.26 -0.6 467,435 - Dshi_0482 0.28 -0.3 467,435 - Dshi_0482 0.28 -0.6 467,435 - Dshi_0482 0.28 -0.5 467,452 + Dshi_0482 0.31 +0.3 467,453 - Dshi_0482 0.32 -0.2 467,482 + Dshi_0482 0.38 +0.4 467,482 + Dshi_0482 0.38 +0.0 467,482 + Dshi_0482 0.38 -0.4 467,482 + Dshi_0482 0.38 +1.9 467,490 - Dshi_0482 0.39 -1.0 467,495 + Dshi_0482 0.40 -1.7 467,495 + Dshi_0482 0.40 +0.2 467,500 + Dshi_0482 0.41 +0.3 467,587 - Dshi_0482 0.59 -1.2 467,589 + Dshi_0482 0.60 +0.3 467,589 + Dshi_0482 0.60 -0.7 467,597 + Dshi_0482 0.61 -1.8 467,597 - Dshi_0482 0.61 -0.9 467,597 - Dshi_0482 0.61 -0.3 467,597 - Dshi_0482 0.61 -1.0 467,603 + Dshi_0482 0.63 -0.4 467,634 - Dshi_0482 0.69 +0.1 467,636 + Dshi_0482 0.69 -0.5 467,659 - Dshi_0482 0.74 +0.9 467,661 + Dshi_0482 0.74 +0.3 467,670 - Dshi_0482 0.76 +0.2 467,704 + Dshi_0482 0.83 +0.2 467,704 + Dshi_0482 0.83 +0.6 467,709 + Dshi_0482 0.84 +1.1 467,711 - Dshi_0482 0.85 -0.7 467,711 - Dshi_0482 0.85 +0.9 467,717 - Dshi_0482 0.86 -0.3 467,723 + Dshi_0482 0.87 +0.1 467,723 + Dshi_0482 0.87 -1.3 467,750 + +1.3 467,758 - -0.3 467,758 - +0.6 467,820 - -0.3 467,835 - -1.3 467,835 - -0.7 467,835 - -0.8 467,835 - -0.5 467,850 + -0.9 467,858 - +3.1 467,864 + -0.7 467,864 + +1.3 467,872 - -0.3 467,875 + -0.5 467,891 - -1.5 467,931 + -0.8 467,939 - +1.9 467,939 - -1.5 467,984 + -0.4 467,984 + -0.6 468,030 + -0.5 468,064 - Dshi_0483 0.10 -0.8 468,077 + Dshi_0483 0.11 +4.3 468,090 + Dshi_0483 0.12 -1.7 468,098 - Dshi_0483 0.13 -0.5 468,098 - Dshi_0483 0.13 -0.1 468,165 - Dshi_0483 0.19 -0.1 468,201 + Dshi_0483 0.22 +0.7 468,202 - Dshi_0483 0.22 +0.3 468,232 - Dshi_0483 0.24 -2.5 468,307 - Dshi_0483 0.31 +0.3 468,327 + Dshi_0483 0.32 +0.6 468,351 + Dshi_0483 0.34 -0.7 468,371 + Dshi_0483 0.36 +0.0 468,381 + Dshi_0483 0.37 +0.9 468,381 + Dshi_0483 0.37 +1.1 468,389 - Dshi_0483 0.38 +0.7 468,389 - Dshi_0483 0.38 -0.3 468,494 + Dshi_0483 0.46 -0.0 468,525 - Dshi_0483 0.49 -0.5 468,549 + Dshi_0483 0.51 +0.6 468,598 - Dshi_0483 0.55 +3.5 468,598 - Dshi_0483 0.55 +0.0 468,619 - Dshi_0483 0.57 -1.3 468,663 - Dshi_0483 0.61 -0.4 468,668 - Dshi_0483 0.61 +0.5 468,676 - Dshi_0483 0.62 -0.2 468,698 + Dshi_0483 0.64 -0.7 468,699 - Dshi_0483 0.64 +0.7 468,699 - Dshi_0483 0.64 +0.8 468,706 - Dshi_0483 0.64 +0.6 468,741 - Dshi_0483 0.67 -0.3 468,755 - Dshi_0483 0.68 -0.4 468,757 - Dshi_0483 0.69 -0.7 468,761 + Dshi_0483 0.69 +0.5 468,762 + Dshi_0483 0.69 -1.2 468,768 + Dshi_0483 0.69 -4.1 468,770 - Dshi_0483 0.70 +0.7 468,770 - Dshi_0483 0.70 -0.1 468,778 - Dshi_0483 0.70 -1.0
Or see this region's nucleotide sequence