Experiment: m.b. benzoic 0.32 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0264 and Dshi_0265 are separated by 294 nucleotides Dshi_0265 and Dshi_0266 are separated by 72 nucleotides Dshi_0266 and Dshi_0267 are separated by 136 nucleotides
Dshi_0264: Dshi_0264 - hypothetical protein (RefSeq), at 260,484 to 261,542
_0264
Dshi_0265: Dshi_0265 - ribosomal protein L10 (RefSeq), at 261,837 to 262,355
_0265
Dshi_0266: Dshi_0266 - ribosomal protein L7/L12 (RefSeq), at 262,428 to 262,808
_0266
Dshi_0267: Dshi_0267 - hypothetical protein (RefSeq), at 262,945 to 264,294
_0267
Position (kb) 262
263 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 261.507 kb on - strand at 261.507 kb on - strand at 261.568 kb on - strand at 261.568 kb on - strand at 261.568 kb on - strand at 262.879 kb on + strand at 262.902 kb on + strand at 262.902 kb on + strand at 262.966 kb on - strand at 262.968 kb on + strand at 263.002 kb on + strand at 263.018 kb on - strand at 263.021 kb on + strand at 263.033 kb on + strand at 263.072 kb on + strand at 263.128 kb on + strand, within Dshi_0267 at 263.128 kb on + strand, within Dshi_0267 at 263.136 kb on - strand, within Dshi_0267 at 263.181 kb on + strand, within Dshi_0267 at 263.230 kb on - strand, within Dshi_0267 at 263.232 kb on + strand, within Dshi_0267 at 263.265 kb on + strand, within Dshi_0267 at 263.349 kb on - strand, within Dshi_0267 at 263.396 kb on + strand, within Dshi_0267 at 263.404 kb on - strand, within Dshi_0267 at 263.406 kb on + strand, within Dshi_0267 at 263.457 kb on + strand, within Dshi_0267 at 263.503 kb on - strand, within Dshi_0267 at 263.645 kb on + strand, within Dshi_0267 at 263.759 kb on + strand, within Dshi_0267 at 263.759 kb on + strand, within Dshi_0267 at 263.759 kb on + strand, within Dshi_0267 at 263.767 kb on - strand, within Dshi_0267
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. benzoic 0.32 mg/ml remove 261,507 - +0.1 261,507 - +2.2 261,568 - -0.5 261,568 - -0.0 261,568 - +3.7 262,879 + +0.0 262,902 + -1.3 262,902 + +0.4 262,966 - +0.0 262,968 + -0.9 263,002 + -0.6 263,018 - +1.0 263,021 + +0.4 263,033 + +0.8 263,072 + +0.6 263,128 + Dshi_0267 0.14 -1.6 263,128 + Dshi_0267 0.14 +3.6 263,136 - Dshi_0267 0.14 -0.0 263,181 + Dshi_0267 0.17 -1.4 263,230 - Dshi_0267 0.21 +0.2 263,232 + Dshi_0267 0.21 +1.8 263,265 + Dshi_0267 0.24 -2.0 263,349 - Dshi_0267 0.30 +0.4 263,396 + Dshi_0267 0.33 -1.7 263,404 - Dshi_0267 0.34 +1.0 263,406 + Dshi_0267 0.34 +0.4 263,457 + Dshi_0267 0.38 +3.0 263,503 - Dshi_0267 0.41 -0.7 263,645 + Dshi_0267 0.52 -0.6 263,759 + Dshi_0267 0.60 +2.2 263,759 + Dshi_0267 0.60 +0.9 263,759 + Dshi_0267 0.60 -2.7 263,767 - Dshi_0267 0.61 -1.0
Or see this region's nucleotide sequence