Experiment: L-Phenylalanine as (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_740 and HP15_741 are separated by 226 nucleotides HP15_741 and HP15_742 are separated by 127 nucleotides HP15_742 and HP15_743 are separated by 248 nucleotides HP15_743 and HP15_744 are separated by 13 nucleotides
HP15_740: HP15_740 - oxidoreductase Tas, aldo/keto reductase family protein, at 748,305 to 749,342
_740
HP15_741: HP15_741 - DNA polymerase IV-like protein, at 749,569 to 749,892
_741
HP15_742: HP15_742 - acetyl-CoA hydrolase, at 750,020 to 752,230
_742
HP15_743: HP15_743 - hypothetical protein, at 752,479 to 752,604
_743
HP15_744: HP15_744 - phospholipid/glycerol acyltransferase, at 752,618 to 753,478
_744
Position (kb) 750
751
752
753 Strain fitness (log2 ratio) -1
0
1
2 at 749.073 kb on - strand, within HP15_740 at 749.121 kb on + strand, within HP15_740 at 749.201 kb on - strand, within HP15_740 at 749.219 kb on + strand, within HP15_740 at 749.281 kb on + strand at 749.289 kb on - strand at 749.373 kb on + strand at 749.405 kb on - strand at 749.480 kb on + strand at 749.590 kb on + strand at 749.714 kb on - strand, within HP15_741 at 749.740 kb on - strand, within HP15_741 at 749.771 kb on + strand, within HP15_741 at 749.779 kb on - strand, within HP15_741 at 749.779 kb on - strand, within HP15_741 at 749.853 kb on + strand, within HP15_741 at 749.886 kb on + strand at 749.894 kb on - strand at 749.894 kb on - strand at 750.293 kb on + strand, within HP15_742 at 750.434 kb on - strand, within HP15_742 at 750.464 kb on + strand, within HP15_742 at 750.471 kb on + strand, within HP15_742 at 750.495 kb on + strand, within HP15_742 at 750.505 kb on + strand, within HP15_742 at 750.526 kb on - strand, within HP15_742 at 750.685 kb on + strand, within HP15_742 at 750.693 kb on - strand, within HP15_742 at 750.693 kb on - strand, within HP15_742 at 750.694 kb on + strand, within HP15_742 at 750.714 kb on - strand, within HP15_742 at 750.821 kb on + strand, within HP15_742 at 750.829 kb on - strand, within HP15_742 at 750.894 kb on - strand, within HP15_742 at 750.896 kb on + strand, within HP15_742 at 751.065 kb on + strand, within HP15_742 at 751.065 kb on + strand, within HP15_742 at 751.113 kb on + strand, within HP15_742 at 751.338 kb on + strand, within HP15_742 at 751.434 kb on - strand, within HP15_742 at 751.504 kb on + strand, within HP15_742 at 751.534 kb on + strand, within HP15_742 at 751.539 kb on + strand, within HP15_742 at 751.547 kb on - strand, within HP15_742 at 751.559 kb on - strand, within HP15_742 at 751.587 kb on - strand, within HP15_742 at 751.620 kb on + strand, within HP15_742 at 751.657 kb on + strand, within HP15_742 at 751.660 kb on - strand, within HP15_742 at 751.665 kb on - strand, within HP15_742 at 751.669 kb on + strand, within HP15_742 at 751.677 kb on - strand, within HP15_742 at 751.677 kb on - strand, within HP15_742 at 751.706 kb on - strand, within HP15_742 at 751.760 kb on + strand, within HP15_742 at 751.797 kb on + strand, within HP15_742 at 751.901 kb on - strand, within HP15_742 at 752.025 kb on - strand at 752.136 kb on - strand at 752.144 kb on - strand at 752.189 kb on - strand at 752.218 kb on + strand at 752.234 kb on - strand at 752.252 kb on - strand at 752.351 kb on - strand at 752.458 kb on - strand at 752.458 kb on - strand at 752.492 kb on - strand, within HP15_743 at 752.499 kb on - strand, within HP15_743 at 752.667 kb on + strand at 752.694 kb on + strand at 752.694 kb on + strand at 752.771 kb on - strand, within HP15_744 at 752.775 kb on - strand, within HP15_744 at 752.821 kb on - strand, within HP15_744 at 752.830 kb on + strand at 752.835 kb on + strand, within HP15_744 at 752.985 kb on + strand, within HP15_744 at 752.993 kb on - strand, within HP15_744 at 753.022 kb on + strand, within HP15_744 at 753.058 kb on - strand, within HP15_744 at 753.100 kb on - strand, within HP15_744 at 753.107 kb on + strand, within HP15_744 at 753.107 kb on + strand, within HP15_744 at 753.110 kb on - strand, within HP15_744 at 753.115 kb on - strand, within HP15_744 at 753.115 kb on - strand, within HP15_744 at 753.219 kb on - strand, within HP15_744
Per-strain Table
Position Strand Gene LocusTag Fraction L-Phenylalanine as (N) remove 749,073 - HP15_740 0.74 +0.0 749,121 + HP15_740 0.79 +0.6 749,201 - HP15_740 0.86 -0.1 749,219 + HP15_740 0.88 +1.1 749,281 + -0.7 749,289 - -0.2 749,373 + +1.4 749,405 - -0.6 749,480 + -0.1 749,590 + +1.0 749,714 - HP15_741 0.45 -0.2 749,740 - HP15_741 0.53 -0.3 749,771 + HP15_741 0.62 +0.0 749,779 - HP15_741 0.65 +0.3 749,779 - HP15_741 0.65 -0.6 749,853 + HP15_741 0.88 -0.1 749,886 + -0.9 749,894 - +0.5 749,894 - +1.1 750,293 + HP15_742 0.12 +1.6 750,434 - HP15_742 0.19 +2.3 750,464 + HP15_742 0.20 -0.1 750,471 + HP15_742 0.20 +0.6 750,495 + HP15_742 0.21 +1.6 750,505 + HP15_742 0.22 -0.7 750,526 - HP15_742 0.23 -0.2 750,685 + HP15_742 0.30 +1.0 750,693 - HP15_742 0.30 -0.6 750,693 - HP15_742 0.30 +0.4 750,694 + HP15_742 0.30 +1.3 750,714 - HP15_742 0.31 +0.1 750,821 + HP15_742 0.36 +1.2 750,829 - HP15_742 0.37 -0.2 750,894 - HP15_742 0.40 -0.4 750,896 + HP15_742 0.40 +0.1 751,065 + HP15_742 0.47 +0.1 751,065 + HP15_742 0.47 -0.2 751,113 + HP15_742 0.49 +0.9 751,338 + HP15_742 0.60 +0.7 751,434 - HP15_742 0.64 -0.3 751,504 + HP15_742 0.67 -0.3 751,534 + HP15_742 0.68 +1.1 751,539 + HP15_742 0.69 +0.8 751,547 - HP15_742 0.69 -0.1 751,559 - HP15_742 0.70 -0.0 751,587 - HP15_742 0.71 -0.2 751,620 + HP15_742 0.72 -0.3 751,657 + HP15_742 0.74 +1.0 751,660 - HP15_742 0.74 -0.3 751,665 - HP15_742 0.74 +0.9 751,669 + HP15_742 0.75 +1.1 751,677 - HP15_742 0.75 +0.6 751,677 - HP15_742 0.75 +0.5 751,706 - HP15_742 0.76 +2.7 751,760 + HP15_742 0.79 +1.0 751,797 + HP15_742 0.80 +1.2 751,901 - HP15_742 0.85 +0.7 752,025 - +0.8 752,136 - -1.7 752,144 - +0.0 752,189 - +1.2 752,218 + -0.6 752,234 - +0.3 752,252 - -0.0 752,351 - -0.3 752,458 - -0.3 752,458 - +1.0 752,492 - HP15_743 0.10 +0.6 752,499 - HP15_743 0.16 -0.2 752,667 + -0.6 752,694 + -0.2 752,694 + -0.1 752,771 - HP15_744 0.18 +0.5 752,775 - HP15_744 0.18 +0.3 752,821 - HP15_744 0.24 -0.3 752,830 + -1.3 752,835 + HP15_744 0.25 -0.0 752,985 + HP15_744 0.43 -0.4 752,993 - HP15_744 0.44 +1.1 753,022 + HP15_744 0.47 +0.5 753,058 - HP15_744 0.51 +1.1 753,100 - HP15_744 0.56 -0.6 753,107 + HP15_744 0.57 +0.5 753,107 + HP15_744 0.57 -0.1 753,110 - HP15_744 0.57 +1.0 753,115 - HP15_744 0.58 -0.5 753,115 - HP15_744 0.58 -0.4 753,219 - HP15_744 0.70 +0.5
Or see this region's nucleotide sequence