Strain Fitness in Marinobacter adhaerens HP15 around HP15_3214

Experiment: L-Phenylalanine as (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_3213 and HP15_3214 are separated by 148 nucleotidesHP15_3214 and HP15_3215 are separated by 119 nucleotides HP15_3213: HP15_3213 - threonine dehydratase biosynthetic, at 3,363,108 to 3,364,643 _3213 HP15_3214: HP15_3214 - ribose-5-phosphate isomerase A, at 3,364,792 to 3,365,475 _3214 HP15_3215: HP15_3215 - acyl-CoA dehydrogenase domain protein, at 3,365,595 to 3,366,761 _3215 Position (kb) 3364 3365 3366Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 3363.800 kb on - strand, within HP15_3213at 3363.961 kb on + strand, within HP15_3213at 3364.069 kb on + strand, within HP15_3213at 3364.117 kb on - strand, within HP15_3213at 3364.218 kb on - strand, within HP15_3213at 3364.308 kb on + strand, within HP15_3213at 3364.316 kb on - strand, within HP15_3213at 3364.336 kb on + strand, within HP15_3213at 3364.393 kb on + strand, within HP15_3213at 3364.436 kb on - strand, within HP15_3213at 3364.436 kb on - strand, within HP15_3213at 3364.461 kb on - strand, within HP15_3213at 3364.549 kb on + strandat 3364.572 kb on + strandat 3364.572 kb on + strandat 3364.672 kb on + strandat 3364.747 kb on - strandat 3365.612 kb on + strandat 3365.616 kb on - strandat 3365.721 kb on - strand, within HP15_3215at 3365.721 kb on - strand, within HP15_3215at 3365.811 kb on - strand, within HP15_3215at 3365.883 kb on + strand, within HP15_3215at 3365.883 kb on + strand, within HP15_3215at 3365.891 kb on - strand, within HP15_3215at 3365.891 kb on - strand, within HP15_3215at 3365.891 kb on - strand, within HP15_3215at 3365.891 kb on - strand, within HP15_3215at 3365.941 kb on + strand, within HP15_3215at 3365.941 kb on + strand, within HP15_3215at 3365.949 kb on - strand, within HP15_3215at 3365.997 kb on - strand, within HP15_3215at 3366.032 kb on + strand, within HP15_3215at 3366.032 kb on + strand, within HP15_3215at 3366.116 kb on + strand, within HP15_3215at 3366.116 kb on + strand, within HP15_3215at 3366.124 kb on - strand, within HP15_3215at 3366.193 kb on - strand, within HP15_3215at 3366.377 kb on - strandat 3366.379 kb on - strand, within HP15_3215at 3366.415 kb on - strand, within HP15_3215

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Phenylalanine as (N)
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3,363,800 - HP15_3213 0.45 -1.7
3,363,961 + HP15_3213 0.56 -2.5
3,364,069 + HP15_3213 0.63 -1.3
3,364,117 - HP15_3213 0.66 -2.6
3,364,218 - HP15_3213 0.72 -3.5
3,364,308 + HP15_3213 0.78 -1.1
3,364,316 - HP15_3213 0.79 -1.4
3,364,336 + HP15_3213 0.80 -0.6
3,364,393 + HP15_3213 0.84 -3.1
3,364,436 - HP15_3213 0.86 -2.4
3,364,436 - HP15_3213 0.86 -2.8
3,364,461 - HP15_3213 0.88 -2.3
3,364,549 + -2.5
3,364,572 + -3.5
3,364,572 + -2.0
3,364,672 + -1.5
3,364,747 - -0.1
3,365,612 + +0.1
3,365,616 - -0.3
3,365,721 - HP15_3215 0.11 +0.3
3,365,721 - HP15_3215 0.11 +2.1
3,365,811 - HP15_3215 0.19 -0.2
3,365,883 + HP15_3215 0.25 +1.1
3,365,883 + HP15_3215 0.25 +0.2
3,365,891 - HP15_3215 0.25 +0.5
3,365,891 - HP15_3215 0.25 +0.0
3,365,891 - HP15_3215 0.25 +0.6
3,365,891 - HP15_3215 0.25 +0.2
3,365,941 + HP15_3215 0.30 +0.1
3,365,941 + HP15_3215 0.30 +0.2
3,365,949 - HP15_3215 0.30 +0.1
3,365,997 - HP15_3215 0.34 -0.7
3,366,032 + HP15_3215 0.37 -0.2
3,366,032 + HP15_3215 0.37 -0.3
3,366,116 + HP15_3215 0.45 -0.1
3,366,116 + HP15_3215 0.45 -0.3
3,366,124 - HP15_3215 0.45 -1.0
3,366,193 - HP15_3215 0.51 -0.3
3,366,377 - +2.2
3,366,379 - HP15_3215 0.67 -0.3
3,366,415 - HP15_3215 0.70 -0.3

Or see this region's nucleotide sequence