Experiment: L-Phenylalanine as (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_3213 and HP15_3214 are separated by 148 nucleotides HP15_3214 and HP15_3215 are separated by 119 nucleotides
HP15_3213: HP15_3213 - threonine dehydratase biosynthetic, at 3,363,108 to 3,364,643
_3213
HP15_3214: HP15_3214 - ribose-5-phosphate isomerase A, at 3,364,792 to 3,365,475
_3214
HP15_3215: HP15_3215 - acyl-CoA dehydrogenase domain protein, at 3,365,595 to 3,366,761
_3215
Position (kb)
3364
3365
3366 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3363.800 kb on - strand, within HP15_3213 at 3363.961 kb on + strand, within HP15_3213 at 3364.069 kb on + strand, within HP15_3213 at 3364.117 kb on - strand, within HP15_3213 at 3364.218 kb on - strand, within HP15_3213 at 3364.308 kb on + strand, within HP15_3213 at 3364.316 kb on - strand, within HP15_3213 at 3364.336 kb on + strand, within HP15_3213 at 3364.393 kb on + strand, within HP15_3213 at 3364.436 kb on - strand, within HP15_3213 at 3364.436 kb on - strand, within HP15_3213 at 3364.461 kb on - strand, within HP15_3213 at 3364.549 kb on + strand at 3364.572 kb on + strand at 3364.572 kb on + strand at 3364.672 kb on + strand at 3364.747 kb on - strand at 3365.612 kb on + strand at 3365.616 kb on - strand at 3365.721 kb on - strand, within HP15_3215 at 3365.721 kb on - strand, within HP15_3215 at 3365.811 kb on - strand, within HP15_3215 at 3365.883 kb on + strand, within HP15_3215 at 3365.883 kb on + strand, within HP15_3215 at 3365.891 kb on - strand, within HP15_3215 at 3365.891 kb on - strand, within HP15_3215 at 3365.891 kb on - strand, within HP15_3215 at 3365.891 kb on - strand, within HP15_3215 at 3365.941 kb on + strand, within HP15_3215 at 3365.941 kb on + strand, within HP15_3215 at 3365.949 kb on - strand, within HP15_3215 at 3365.997 kb on - strand, within HP15_3215 at 3366.032 kb on + strand, within HP15_3215 at 3366.032 kb on + strand, within HP15_3215 at 3366.116 kb on + strand, within HP15_3215 at 3366.116 kb on + strand, within HP15_3215 at 3366.124 kb on - strand, within HP15_3215 at 3366.193 kb on - strand, within HP15_3215 at 3366.377 kb on - strand at 3366.379 kb on - strand, within HP15_3215 at 3366.415 kb on - strand, within HP15_3215
Per-strain Table
Position Strand Gene LocusTag Fraction L-Phenylalanine as (N) remove 3,363,800 - HP15_3213 0.45 -1.7 3,363,961 + HP15_3213 0.56 -2.5 3,364,069 + HP15_3213 0.63 -1.3 3,364,117 - HP15_3213 0.66 -2.6 3,364,218 - HP15_3213 0.72 -3.5 3,364,308 + HP15_3213 0.78 -1.1 3,364,316 - HP15_3213 0.79 -1.4 3,364,336 + HP15_3213 0.80 -0.6 3,364,393 + HP15_3213 0.84 -3.1 3,364,436 - HP15_3213 0.86 -2.4 3,364,436 - HP15_3213 0.86 -2.8 3,364,461 - HP15_3213 0.88 -2.3 3,364,549 + -2.5 3,364,572 + -3.5 3,364,572 + -2.0 3,364,672 + -1.5 3,364,747 - -0.1 3,365,612 + +0.1 3,365,616 - -0.3 3,365,721 - HP15_3215 0.11 +0.3 3,365,721 - HP15_3215 0.11 +2.1 3,365,811 - HP15_3215 0.19 -0.2 3,365,883 + HP15_3215 0.25 +1.1 3,365,883 + HP15_3215 0.25 +0.2 3,365,891 - HP15_3215 0.25 +0.5 3,365,891 - HP15_3215 0.25 +0.0 3,365,891 - HP15_3215 0.25 +0.6 3,365,891 - HP15_3215 0.25 +0.2 3,365,941 + HP15_3215 0.30 +0.1 3,365,941 + HP15_3215 0.30 +0.2 3,365,949 - HP15_3215 0.30 +0.1 3,365,997 - HP15_3215 0.34 -0.7 3,366,032 + HP15_3215 0.37 -0.2 3,366,032 + HP15_3215 0.37 -0.3 3,366,116 + HP15_3215 0.45 -0.1 3,366,116 + HP15_3215 0.45 -0.3 3,366,124 - HP15_3215 0.45 -1.0 3,366,193 - HP15_3215 0.51 -0.3 3,366,377 - +2.2 3,366,379 - HP15_3215 0.67 -0.3 3,366,415 - HP15_3215 0.70 -0.3
Or see this region's nucleotide sequence