Strain Fitness in Marinobacter adhaerens HP15 around HP15_3071

Experiment: L-Phenylalanine as (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_3069 and HP15_tRNA49 are separated by 320 nucleotidesHP15_tRNA49 and HP15_3070 are separated by 7 nucleotidesHP15_3070 and HP15_3071 are separated by 24 nucleotidesHP15_3071 and HP15_3072 are separated by 75 nucleotides HP15_3069: HP15_3069 - protein belonging to uncharacterized protein family UPF0090, at 3,222,705 to 3,223,166 _3069 HP15_tRNA49: HP15_tRNA49 - tRNA-Leu, at 3,223,487 to 3,223,571 _tRNA49 HP15_3070: HP15_3070 - preprotein translocase SecG subunit, at 3,223,579 to 3,223,959 _3070 HP15_3071: HP15_3071 - triosephosphate isomerase, at 3,223,984 to 3,224,742 _3071 HP15_3072: HP15_3072 - phosphoglucosamine mutase, at 3,224,818 to 3,226,161 _3072 Position (kb) 3223 3224 3225Strain fitness (log2 ratio) -1 0 1at 3224.305 kb on - strand, within HP15_3071at 3224.747 kb on - strandat 3224.773 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Phenylalanine as (N)
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3,224,305 - HP15_3071 0.42 +0.3
3,224,747 - +0.7
3,224,773 - -0.5

Or see this region's nucleotide sequence