Strain Fitness in Marinobacter adhaerens HP15 around HP15_2750

Experiment: L-Phenylalanine as (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_2749 and HP15_2750 are separated by 121 nucleotidesHP15_2750 and HP15_2751 are separated by 9 nucleotides HP15_2749: HP15_2749 - membrane protein containing DUF6, transmembrane, at 2,900,027 to 2,900,932 _2749 HP15_2750: HP15_2750 - protein containing carbamoyl phosphate synthetase, large subunit, ATP-binding / carboxyl transferase / carbamoyl phosphate synthase, large subunit, N-terminal / biotin carboxylase, C-terminal / biotin/lipoyl attachment, at 2,901,054 to 2,904,329 _2750 HP15_2751: HP15_2751 - conserved hypothetical protein, secreted, at 2,904,339 to 2,906,039 _2751 Position (kb) 2901 2902 2903 2904 2905Strain fitness (log2 ratio) -1 0 1 2at 2900.199 kb on - strand, within HP15_2749at 2900.312 kb on - strand, within HP15_2749at 2900.481 kb on + strand, within HP15_2749at 2900.632 kb on + strand, within HP15_2749at 2900.710 kb on - strand, within HP15_2749at 2900.733 kb on - strand, within HP15_2749at 2900.747 kb on - strand, within HP15_2749at 2900.810 kb on + strand, within HP15_2749at 2900.852 kb on - strandat 2901.042 kb on + strandat 2901.267 kb on + strandat 2901.275 kb on - strandat 2901.275 kb on - strandat 2901.376 kb on + strandat 2901.468 kb on - strand, within HP15_2750at 2901.470 kb on - strand, within HP15_2750at 2901.523 kb on - strand, within HP15_2750at 2901.565 kb on + strand, within HP15_2750at 2901.609 kb on + strand, within HP15_2750at 2901.697 kb on + strand, within HP15_2750at 2901.831 kb on - strand, within HP15_2750at 2901.850 kb on + strand, within HP15_2750at 2901.873 kb on - strand, within HP15_2750at 2901.942 kb on - strand, within HP15_2750at 2901.952 kb on - strand, within HP15_2750at 2901.952 kb on - strand, within HP15_2750at 2902.006 kb on + strand, within HP15_2750at 2902.014 kb on - strand, within HP15_2750at 2902.014 kb on - strand, within HP15_2750at 2902.167 kb on - strand, within HP15_2750at 2902.316 kb on + strand, within HP15_2750at 2902.318 kb on + strand, within HP15_2750at 2902.337 kb on - strand, within HP15_2750at 2902.411 kb on + strand, within HP15_2750at 2902.458 kb on + strand, within HP15_2750at 2902.545 kb on + strand, within HP15_2750at 2902.612 kb on - strand, within HP15_2750at 2902.612 kb on - strand, within HP15_2750at 2902.663 kb on - strand, within HP15_2750at 2902.681 kb on + strand, within HP15_2750at 2902.712 kb on - strand, within HP15_2750at 2902.786 kb on - strand, within HP15_2750at 2902.786 kb on - strand, within HP15_2750at 2902.786 kb on - strand, within HP15_2750at 2902.786 kb on - strand, within HP15_2750at 2902.800 kb on + strand, within HP15_2750at 2902.827 kb on + strand, within HP15_2750at 2902.827 kb on + strand, within HP15_2750at 2902.845 kb on - strand, within HP15_2750at 2902.859 kb on + strand, within HP15_2750at 2902.867 kb on - strand, within HP15_2750at 2902.893 kb on + strand, within HP15_2750at 2903.245 kb on + strand, within HP15_2750at 2903.270 kb on + strand, within HP15_2750at 2903.298 kb on - strand, within HP15_2750at 2903.394 kb on - strand, within HP15_2750at 2903.424 kb on - strand, within HP15_2750at 2903.439 kb on - strand, within HP15_2750at 2903.465 kb on + strand, within HP15_2750at 2903.551 kb on + strand, within HP15_2750at 2903.655 kb on + strand, within HP15_2750at 2903.663 kb on - strand, within HP15_2750at 2903.668 kb on - strand, within HP15_2750at 2903.705 kb on - strand, within HP15_2750at 2903.803 kb on - strand, within HP15_2750at 2903.855 kb on + strand, within HP15_2750at 2903.861 kb on - strand, within HP15_2750at 2903.863 kb on - strand, within HP15_2750at 2903.964 kb on + strand, within HP15_2750at 2903.989 kb on - strand, within HP15_2750at 2903.997 kb on + strand, within HP15_2750at 2904.010 kb on - strandat 2904.062 kb on + strandat 2904.093 kb on + strandat 2904.183 kb on - strandat 2904.185 kb on + strandat 2904.193 kb on - strandat 2904.193 kb on - strandat 2904.244 kb on + strandat 2904.488 kb on - strandat 2904.495 kb on + strandat 2904.528 kb on + strand, within HP15_2751at 2904.572 kb on + strand, within HP15_2751at 2904.613 kb on + strand, within HP15_2751at 2904.613 kb on + strand, within HP15_2751at 2904.613 kb on - strand, within HP15_2751at 2904.636 kb on - strand, within HP15_2751at 2904.681 kb on + strand, within HP15_2751at 2904.755 kb on + strand, within HP15_2751at 2904.891 kb on + strand, within HP15_2751at 2904.989 kb on - strand, within HP15_2751at 2905.017 kb on + strand, within HP15_2751at 2905.076 kb on - strand, within HP15_2751

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Phenylalanine as (N)
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2,900,199 - HP15_2749 0.19 -0.7
2,900,312 - HP15_2749 0.31 +0.9
2,900,481 + HP15_2749 0.50 -0.9
2,900,632 + HP15_2749 0.67 -0.6
2,900,710 - HP15_2749 0.75 +0.9
2,900,733 - HP15_2749 0.78 -0.8
2,900,747 - HP15_2749 0.79 +1.3
2,900,810 + HP15_2749 0.86 +0.4
2,900,852 - +0.6
2,901,042 + -0.1
2,901,267 + -0.0
2,901,275 - +1.4
2,901,275 - +1.2
2,901,376 + +0.1
2,901,468 - HP15_2750 0.13 -0.2
2,901,470 - HP15_2750 0.13 -0.3
2,901,523 - HP15_2750 0.14 +0.7
2,901,565 + HP15_2750 0.16 +0.2
2,901,609 + HP15_2750 0.17 -0.9
2,901,697 + HP15_2750 0.20 -0.2
2,901,831 - HP15_2750 0.24 -0.5
2,901,850 + HP15_2750 0.24 -0.4
2,901,873 - HP15_2750 0.25 +0.7
2,901,942 - HP15_2750 0.27 -0.1
2,901,952 - HP15_2750 0.27 +0.6
2,901,952 - HP15_2750 0.27 -0.0
2,902,006 + HP15_2750 0.29 +1.4
2,902,014 - HP15_2750 0.29 +1.0
2,902,014 - HP15_2750 0.29 +0.7
2,902,167 - HP15_2750 0.34 -1.0
2,902,316 + HP15_2750 0.39 +0.4
2,902,318 + HP15_2750 0.39 -0.8
2,902,337 - HP15_2750 0.39 -0.7
2,902,411 + HP15_2750 0.41 +0.1
2,902,458 + HP15_2750 0.43 +1.0
2,902,545 + HP15_2750 0.46 +0.5
2,902,612 - HP15_2750 0.48 -0.1
2,902,612 - HP15_2750 0.48 +0.0
2,902,663 - HP15_2750 0.49 +0.2
2,902,681 + HP15_2750 0.50 -0.6
2,902,712 - HP15_2750 0.51 +0.0
2,902,786 - HP15_2750 0.53 -0.2
2,902,786 - HP15_2750 0.53 -0.7
2,902,786 - HP15_2750 0.53 +0.5
2,902,786 - HP15_2750 0.53 +0.4
2,902,800 + HP15_2750 0.53 +1.0
2,902,827 + HP15_2750 0.54 -1.2
2,902,827 + HP15_2750 0.54 -0.2
2,902,845 - HP15_2750 0.55 -1.2
2,902,859 + HP15_2750 0.55 -0.0
2,902,867 - HP15_2750 0.55 -0.2
2,902,893 + HP15_2750 0.56 -0.5
2,903,245 + HP15_2750 0.67 +0.2
2,903,270 + HP15_2750 0.68 +2.3
2,903,298 - HP15_2750 0.68 -0.1
2,903,394 - HP15_2750 0.71 +1.1
2,903,424 - HP15_2750 0.72 -0.4
2,903,439 - HP15_2750 0.73 -0.5
2,903,465 + HP15_2750 0.74 -0.5
2,903,551 + HP15_2750 0.76 +0.7
2,903,655 + HP15_2750 0.79 +0.7
2,903,663 - HP15_2750 0.80 -0.5
2,903,668 - HP15_2750 0.80 +1.2
2,903,705 - HP15_2750 0.81 -0.2
2,903,803 - HP15_2750 0.84 -0.2
2,903,855 + HP15_2750 0.86 +1.2
2,903,861 - HP15_2750 0.86 -0.5
2,903,863 - HP15_2750 0.86 -0.3
2,903,964 + HP15_2750 0.89 -0.7
2,903,989 - HP15_2750 0.90 +1.2
2,903,997 + HP15_2750 0.90 +0.3
2,904,010 - -0.3
2,904,062 + -0.4
2,904,093 + -0.4
2,904,183 - -0.2
2,904,185 + +1.6
2,904,193 - +0.5
2,904,193 - +0.6
2,904,244 + +0.5
2,904,488 - +1.0
2,904,495 + -0.2
2,904,528 + HP15_2751 0.11 +1.3
2,904,572 + HP15_2751 0.14 +0.3
2,904,613 + HP15_2751 0.16 -0.1
2,904,613 + HP15_2751 0.16 -0.3
2,904,613 - HP15_2751 0.16 +0.1
2,904,636 - HP15_2751 0.17 -0.9
2,904,681 + HP15_2751 0.20 -0.7
2,904,755 + HP15_2751 0.24 -1.0
2,904,891 + HP15_2751 0.32 +1.4
2,904,989 - HP15_2751 0.38 +0.0
2,905,017 + HP15_2751 0.40 -0.8
2,905,076 - HP15_2751 0.43 +0.5

Or see this region's nucleotide sequence