Experiment: L-Phenylalanine as (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_2749 and HP15_2750 are separated by 121 nucleotides HP15_2750 and HP15_2751 are separated by 9 nucleotides
HP15_2749: HP15_2749 - membrane protein containing DUF6, transmembrane, at 2,900,027 to 2,900,932
_2749
HP15_2750: HP15_2750 - protein containing carbamoyl phosphate synthetase, large subunit, ATP-binding / carboxyl transferase / carbamoyl phosphate synthase, large subunit, N-terminal / biotin carboxylase, C-terminal / biotin/lipoyl attachment, at 2,901,054 to 2,904,329
_2750
HP15_2751: HP15_2751 - conserved hypothetical protein, secreted, at 2,904,339 to 2,906,039
_2751
Position (kb)
2901
2902
2903
2904
2905 Strain fitness (log2 ratio)
-1
0
1
2 at 2900.199 kb on - strand, within HP15_2749 at 2900.312 kb on - strand, within HP15_2749 at 2900.481 kb on + strand, within HP15_2749 at 2900.632 kb on + strand, within HP15_2749 at 2900.710 kb on - strand, within HP15_2749 at 2900.733 kb on - strand, within HP15_2749 at 2900.747 kb on - strand, within HP15_2749 at 2900.810 kb on + strand, within HP15_2749 at 2900.852 kb on - strand at 2901.042 kb on + strand at 2901.267 kb on + strand at 2901.275 kb on - strand at 2901.275 kb on - strand at 2901.376 kb on + strand at 2901.468 kb on - strand, within HP15_2750 at 2901.470 kb on - strand, within HP15_2750 at 2901.523 kb on - strand, within HP15_2750 at 2901.565 kb on + strand, within HP15_2750 at 2901.609 kb on + strand, within HP15_2750 at 2901.697 kb on + strand, within HP15_2750 at 2901.831 kb on - strand, within HP15_2750 at 2901.850 kb on + strand, within HP15_2750 at 2901.873 kb on - strand, within HP15_2750 at 2901.942 kb on - strand, within HP15_2750 at 2901.952 kb on - strand, within HP15_2750 at 2901.952 kb on - strand, within HP15_2750 at 2902.006 kb on + strand, within HP15_2750 at 2902.014 kb on - strand, within HP15_2750 at 2902.014 kb on - strand, within HP15_2750 at 2902.167 kb on - strand, within HP15_2750 at 2902.316 kb on + strand, within HP15_2750 at 2902.318 kb on + strand, within HP15_2750 at 2902.337 kb on - strand, within HP15_2750 at 2902.411 kb on + strand, within HP15_2750 at 2902.458 kb on + strand, within HP15_2750 at 2902.545 kb on + strand, within HP15_2750 at 2902.612 kb on - strand, within HP15_2750 at 2902.612 kb on - strand, within HP15_2750 at 2902.663 kb on - strand, within HP15_2750 at 2902.681 kb on + strand, within HP15_2750 at 2902.712 kb on - strand, within HP15_2750 at 2902.786 kb on - strand, within HP15_2750 at 2902.786 kb on - strand, within HP15_2750 at 2902.786 kb on - strand, within HP15_2750 at 2902.786 kb on - strand, within HP15_2750 at 2902.800 kb on + strand, within HP15_2750 at 2902.827 kb on + strand, within HP15_2750 at 2902.827 kb on + strand, within HP15_2750 at 2902.845 kb on - strand, within HP15_2750 at 2902.859 kb on + strand, within HP15_2750 at 2902.867 kb on - strand, within HP15_2750 at 2902.893 kb on + strand, within HP15_2750 at 2903.245 kb on + strand, within HP15_2750 at 2903.270 kb on + strand, within HP15_2750 at 2903.298 kb on - strand, within HP15_2750 at 2903.394 kb on - strand, within HP15_2750 at 2903.424 kb on - strand, within HP15_2750 at 2903.439 kb on - strand, within HP15_2750 at 2903.465 kb on + strand, within HP15_2750 at 2903.551 kb on + strand, within HP15_2750 at 2903.655 kb on + strand, within HP15_2750 at 2903.663 kb on - strand, within HP15_2750 at 2903.668 kb on - strand, within HP15_2750 at 2903.705 kb on - strand, within HP15_2750 at 2903.803 kb on - strand, within HP15_2750 at 2903.855 kb on + strand, within HP15_2750 at 2903.861 kb on - strand, within HP15_2750 at 2903.863 kb on - strand, within HP15_2750 at 2903.964 kb on + strand, within HP15_2750 at 2903.989 kb on - strand, within HP15_2750 at 2903.997 kb on + strand, within HP15_2750 at 2904.010 kb on - strand at 2904.062 kb on + strand at 2904.093 kb on + strand at 2904.183 kb on - strand at 2904.185 kb on + strand at 2904.193 kb on - strand at 2904.193 kb on - strand at 2904.244 kb on + strand at 2904.488 kb on - strand at 2904.495 kb on + strand at 2904.528 kb on + strand, within HP15_2751 at 2904.572 kb on + strand, within HP15_2751 at 2904.613 kb on + strand, within HP15_2751 at 2904.613 kb on + strand, within HP15_2751 at 2904.613 kb on - strand, within HP15_2751 at 2904.636 kb on - strand, within HP15_2751 at 2904.681 kb on + strand, within HP15_2751 at 2904.755 kb on + strand, within HP15_2751 at 2904.891 kb on + strand, within HP15_2751 at 2904.989 kb on - strand, within HP15_2751 at 2905.017 kb on + strand, within HP15_2751 at 2905.076 kb on - strand, within HP15_2751
Per-strain Table
Position Strand Gene LocusTag Fraction L-Phenylalanine as (N) remove 2,900,199 - HP15_2749 0.19 -0.7 2,900,312 - HP15_2749 0.31 +0.9 2,900,481 + HP15_2749 0.50 -0.9 2,900,632 + HP15_2749 0.67 -0.6 2,900,710 - HP15_2749 0.75 +0.9 2,900,733 - HP15_2749 0.78 -0.8 2,900,747 - HP15_2749 0.79 +1.3 2,900,810 + HP15_2749 0.86 +0.4 2,900,852 - +0.6 2,901,042 + -0.1 2,901,267 + -0.0 2,901,275 - +1.4 2,901,275 - +1.2 2,901,376 + +0.1 2,901,468 - HP15_2750 0.13 -0.2 2,901,470 - HP15_2750 0.13 -0.3 2,901,523 - HP15_2750 0.14 +0.7 2,901,565 + HP15_2750 0.16 +0.2 2,901,609 + HP15_2750 0.17 -0.9 2,901,697 + HP15_2750 0.20 -0.2 2,901,831 - HP15_2750 0.24 -0.5 2,901,850 + HP15_2750 0.24 -0.4 2,901,873 - HP15_2750 0.25 +0.7 2,901,942 - HP15_2750 0.27 -0.1 2,901,952 - HP15_2750 0.27 +0.6 2,901,952 - HP15_2750 0.27 -0.0 2,902,006 + HP15_2750 0.29 +1.4 2,902,014 - HP15_2750 0.29 +1.0 2,902,014 - HP15_2750 0.29 +0.7 2,902,167 - HP15_2750 0.34 -1.0 2,902,316 + HP15_2750 0.39 +0.4 2,902,318 + HP15_2750 0.39 -0.8 2,902,337 - HP15_2750 0.39 -0.7 2,902,411 + HP15_2750 0.41 +0.1 2,902,458 + HP15_2750 0.43 +1.0 2,902,545 + HP15_2750 0.46 +0.5 2,902,612 - HP15_2750 0.48 -0.1 2,902,612 - HP15_2750 0.48 +0.0 2,902,663 - HP15_2750 0.49 +0.2 2,902,681 + HP15_2750 0.50 -0.6 2,902,712 - HP15_2750 0.51 +0.0 2,902,786 - HP15_2750 0.53 -0.2 2,902,786 - HP15_2750 0.53 -0.7 2,902,786 - HP15_2750 0.53 +0.5 2,902,786 - HP15_2750 0.53 +0.4 2,902,800 + HP15_2750 0.53 +1.0 2,902,827 + HP15_2750 0.54 -1.2 2,902,827 + HP15_2750 0.54 -0.2 2,902,845 - HP15_2750 0.55 -1.2 2,902,859 + HP15_2750 0.55 -0.0 2,902,867 - HP15_2750 0.55 -0.2 2,902,893 + HP15_2750 0.56 -0.5 2,903,245 + HP15_2750 0.67 +0.2 2,903,270 + HP15_2750 0.68 +2.3 2,903,298 - HP15_2750 0.68 -0.1 2,903,394 - HP15_2750 0.71 +1.1 2,903,424 - HP15_2750 0.72 -0.4 2,903,439 - HP15_2750 0.73 -0.5 2,903,465 + HP15_2750 0.74 -0.5 2,903,551 + HP15_2750 0.76 +0.7 2,903,655 + HP15_2750 0.79 +0.7 2,903,663 - HP15_2750 0.80 -0.5 2,903,668 - HP15_2750 0.80 +1.2 2,903,705 - HP15_2750 0.81 -0.2 2,903,803 - HP15_2750 0.84 -0.2 2,903,855 + HP15_2750 0.86 +1.2 2,903,861 - HP15_2750 0.86 -0.5 2,903,863 - HP15_2750 0.86 -0.3 2,903,964 + HP15_2750 0.89 -0.7 2,903,989 - HP15_2750 0.90 +1.2 2,903,997 + HP15_2750 0.90 +0.3 2,904,010 - -0.3 2,904,062 + -0.4 2,904,093 + -0.4 2,904,183 - -0.2 2,904,185 + +1.6 2,904,193 - +0.5 2,904,193 - +0.6 2,904,244 + +0.5 2,904,488 - +1.0 2,904,495 + -0.2 2,904,528 + HP15_2751 0.11 +1.3 2,904,572 + HP15_2751 0.14 +0.3 2,904,613 + HP15_2751 0.16 -0.1 2,904,613 + HP15_2751 0.16 -0.3 2,904,613 - HP15_2751 0.16 +0.1 2,904,636 - HP15_2751 0.17 -0.9 2,904,681 + HP15_2751 0.20 -0.7 2,904,755 + HP15_2751 0.24 -1.0 2,904,891 + HP15_2751 0.32 +1.4 2,904,989 - HP15_2751 0.38 +0.0 2,905,017 + HP15_2751 0.40 -0.8 2,905,076 - HP15_2751 0.43 +0.5
Or see this region's nucleotide sequence