Experiment: L-Phenylalanine as (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_2375 and HP15_2376 are separated by 49 nucleotides HP15_2376 and HP15_2377 are separated by 351 nucleotides
HP15_2375: HP15_2375 - exonuclease I, at 2,503,251 to 2,504,696
_2375
HP15_2376: HP15_2376 - conserved hypothetical protein, secreted, at 2,504,746 to 2,505,630
_2376
HP15_2377: HP15_2377 - response regulator receiver protein, at 2,505,982 to 2,507,010
_2377
Position (kb)
2504
2505
2506 Strain fitness (log2 ratio)
-1
0
1
2 at 2504.691 kb on + strand at 2504.691 kb on + strand at 2504.699 kb on - strand at 2504.791 kb on + strand at 2504.799 kb on - strand at 2504.834 kb on + strand at 2504.875 kb on - strand, within HP15_2376 at 2504.877 kb on + strand, within HP15_2376 at 2504.885 kb on - strand, within HP15_2376 at 2504.910 kb on - strand, within HP15_2376 at 2504.985 kb on - strand, within HP15_2376 at 2504.998 kb on + strand, within HP15_2376 at 2504.998 kb on + strand, within HP15_2376 at 2504.998 kb on + strand, within HP15_2376 at 2504.998 kb on + strand, within HP15_2376 at 2504.998 kb on + strand, within HP15_2376 at 2504.998 kb on + strand, within HP15_2376 at 2504.998 kb on + strand, within HP15_2376 at 2505.006 kb on - strand, within HP15_2376 at 2505.006 kb on - strand, within HP15_2376 at 2505.006 kb on - strand, within HP15_2376 at 2505.006 kb on - strand, within HP15_2376 at 2505.188 kb on + strand, within HP15_2376 at 2505.196 kb on - strand, within HP15_2376 at 2505.196 kb on - strand, within HP15_2376 at 2505.230 kb on + strand, within HP15_2376 at 2505.232 kb on - strand, within HP15_2376 at 2505.482 kb on + strand, within HP15_2376 at 2505.584 kb on + strand at 2505.592 kb on - strand at 2505.762 kb on + strand at 2505.762 kb on + strand at 2505.768 kb on + strand at 2505.790 kb on - strand at 2505.884 kb on + strand at 2505.971 kb on - strand at 2505.989 kb on + strand at 2506.015 kb on + strand at 2506.047 kb on + strand at 2506.141 kb on + strand, within HP15_2377 at 2506.305 kb on - strand, within HP15_2377 at 2506.337 kb on + strand, within HP15_2377 at 2506.354 kb on - strand, within HP15_2377 at 2506.372 kb on + strand, within HP15_2377 at 2506.475 kb on + strand, within HP15_2377 at 2506.547 kb on + strand, within HP15_2377 at 2506.611 kb on + strand, within HP15_2377
Per-strain Table
Position Strand Gene LocusTag Fraction L-Phenylalanine as (N) remove 2,504,691 + -0.0 2,504,691 + -1.1 2,504,699 - +0.9 2,504,791 + +0.1 2,504,799 - -0.8 2,504,834 + -0.3 2,504,875 - HP15_2376 0.15 -0.4 2,504,877 + HP15_2376 0.15 +1.5 2,504,885 - HP15_2376 0.16 -1.6 2,504,910 - HP15_2376 0.19 -0.4 2,504,985 - HP15_2376 0.27 -1.1 2,504,998 + HP15_2376 0.28 +1.0 2,504,998 + HP15_2376 0.28 +0.3 2,504,998 + HP15_2376 0.28 +0.1 2,504,998 + HP15_2376 0.28 +0.4 2,504,998 + HP15_2376 0.28 +0.6 2,504,998 + HP15_2376 0.28 -0.1 2,504,998 + HP15_2376 0.28 -0.5 2,505,006 - HP15_2376 0.29 +0.3 2,505,006 - HP15_2376 0.29 -0.8 2,505,006 - HP15_2376 0.29 +1.1 2,505,006 - HP15_2376 0.29 -0.4 2,505,188 + HP15_2376 0.50 -1.0 2,505,196 - HP15_2376 0.51 -1.1 2,505,196 - HP15_2376 0.51 -0.1 2,505,230 + HP15_2376 0.55 -1.5 2,505,232 - HP15_2376 0.55 +1.2 2,505,482 + HP15_2376 0.83 -0.4 2,505,584 + -0.3 2,505,592 - -0.1 2,505,762 + +1.4 2,505,762 + -0.6 2,505,768 + +0.3 2,505,790 - -0.3 2,505,884 + -0.4 2,505,971 - -0.8 2,505,989 + +1.2 2,506,015 + -0.5 2,506,047 + +1.5 2,506,141 + HP15_2377 0.15 -0.4 2,506,305 - HP15_2377 0.31 +0.9 2,506,337 + HP15_2377 0.34 +1.2 2,506,354 - HP15_2377 0.36 +0.1 2,506,372 + HP15_2377 0.38 +1.8 2,506,475 + HP15_2377 0.48 +0.3 2,506,547 + HP15_2377 0.55 +0.5 2,506,611 + HP15_2377 0.61 -0.4
Or see this region's nucleotide sequence