Strain Fitness in Marinobacter adhaerens HP15 around HP15_2376

Experiment: L-Phenylalanine as (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_2375 and HP15_2376 are separated by 49 nucleotidesHP15_2376 and HP15_2377 are separated by 351 nucleotides HP15_2375: HP15_2375 - exonuclease I, at 2,503,251 to 2,504,696 _2375 HP15_2376: HP15_2376 - conserved hypothetical protein, secreted, at 2,504,746 to 2,505,630 _2376 HP15_2377: HP15_2377 - response regulator receiver protein, at 2,505,982 to 2,507,010 _2377 Position (kb) 2504 2505 2506Strain fitness (log2 ratio) -1 0 1 2at 2504.691 kb on + strandat 2504.691 kb on + strandat 2504.699 kb on - strandat 2504.791 kb on + strandat 2504.799 kb on - strandat 2504.834 kb on + strandat 2504.875 kb on - strand, within HP15_2376at 2504.877 kb on + strand, within HP15_2376at 2504.885 kb on - strand, within HP15_2376at 2504.910 kb on - strand, within HP15_2376at 2504.985 kb on - strand, within HP15_2376at 2504.998 kb on + strand, within HP15_2376at 2504.998 kb on + strand, within HP15_2376at 2504.998 kb on + strand, within HP15_2376at 2504.998 kb on + strand, within HP15_2376at 2504.998 kb on + strand, within HP15_2376at 2504.998 kb on + strand, within HP15_2376at 2504.998 kb on + strand, within HP15_2376at 2505.006 kb on - strand, within HP15_2376at 2505.006 kb on - strand, within HP15_2376at 2505.006 kb on - strand, within HP15_2376at 2505.006 kb on - strand, within HP15_2376at 2505.188 kb on + strand, within HP15_2376at 2505.196 kb on - strand, within HP15_2376at 2505.196 kb on - strand, within HP15_2376at 2505.230 kb on + strand, within HP15_2376at 2505.232 kb on - strand, within HP15_2376at 2505.482 kb on + strand, within HP15_2376at 2505.584 kb on + strandat 2505.592 kb on - strandat 2505.762 kb on + strandat 2505.762 kb on + strandat 2505.768 kb on + strandat 2505.790 kb on - strandat 2505.884 kb on + strandat 2505.971 kb on - strandat 2505.989 kb on + strandat 2506.015 kb on + strandat 2506.047 kb on + strandat 2506.141 kb on + strand, within HP15_2377at 2506.305 kb on - strand, within HP15_2377at 2506.337 kb on + strand, within HP15_2377at 2506.354 kb on - strand, within HP15_2377at 2506.372 kb on + strand, within HP15_2377at 2506.475 kb on + strand, within HP15_2377at 2506.547 kb on + strand, within HP15_2377at 2506.611 kb on + strand, within HP15_2377

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Phenylalanine as (N)
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2,504,691 + -0.0
2,504,691 + -1.1
2,504,699 - +0.9
2,504,791 + +0.1
2,504,799 - -0.8
2,504,834 + -0.3
2,504,875 - HP15_2376 0.15 -0.4
2,504,877 + HP15_2376 0.15 +1.5
2,504,885 - HP15_2376 0.16 -1.6
2,504,910 - HP15_2376 0.19 -0.4
2,504,985 - HP15_2376 0.27 -1.1
2,504,998 + HP15_2376 0.28 +1.0
2,504,998 + HP15_2376 0.28 +0.3
2,504,998 + HP15_2376 0.28 +0.1
2,504,998 + HP15_2376 0.28 +0.4
2,504,998 + HP15_2376 0.28 +0.6
2,504,998 + HP15_2376 0.28 -0.1
2,504,998 + HP15_2376 0.28 -0.5
2,505,006 - HP15_2376 0.29 +0.3
2,505,006 - HP15_2376 0.29 -0.8
2,505,006 - HP15_2376 0.29 +1.1
2,505,006 - HP15_2376 0.29 -0.4
2,505,188 + HP15_2376 0.50 -1.0
2,505,196 - HP15_2376 0.51 -1.1
2,505,196 - HP15_2376 0.51 -0.1
2,505,230 + HP15_2376 0.55 -1.5
2,505,232 - HP15_2376 0.55 +1.2
2,505,482 + HP15_2376 0.83 -0.4
2,505,584 + -0.3
2,505,592 - -0.1
2,505,762 + +1.4
2,505,762 + -0.6
2,505,768 + +0.3
2,505,790 - -0.3
2,505,884 + -0.4
2,505,971 - -0.8
2,505,989 + +1.2
2,506,015 + -0.5
2,506,047 + +1.5
2,506,141 + HP15_2377 0.15 -0.4
2,506,305 - HP15_2377 0.31 +0.9
2,506,337 + HP15_2377 0.34 +1.2
2,506,354 - HP15_2377 0.36 +0.1
2,506,372 + HP15_2377 0.38 +1.8
2,506,475 + HP15_2377 0.48 +0.3
2,506,547 + HP15_2377 0.55 +0.5
2,506,611 + HP15_2377 0.61 -0.4

Or see this region's nucleotide sequence