Strain Fitness in Marinobacter adhaerens HP15 around HP15_2156

Experiment: L-Phenylalanine as (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_2154 and HP15_2155 are separated by 11 nucleotidesHP15_2155 and HP15_2156 are separated by 22 nucleotidesHP15_2156 and HP15_2157 are separated by 223 nucleotides HP15_2154: HP15_2154 - NADP-dependent glyceraldehyde-3-phosphate dehydrogenase, at 2,259,347 to 2,260,978 _2154 HP15_2155: HP15_2155 - triosephosphate isomerase, at 2,260,990 to 2,261,796 _2155 HP15_2156: HP15_2156 - phosphopyruvate hydratase, at 2,261,819 to 2,263,060 _2156 HP15_2157: HP15_2157 - methyl-accepting chemotaxis protein, at 2,263,284 to 2,265,290 _2157 Position (kb) 2261 2262 2263 2264Strain fitness (log2 ratio) -2 -1 0 1at 2260.851 kb on - strandat 2260.861 kb on - strandat 2260.895 kb on + strandat 2261.111 kb on + strand, within HP15_2155at 2261.113 kb on + strand, within HP15_2155at 2261.121 kb on + strand, within HP15_2155at 2261.147 kb on - strand, within HP15_2155at 2261.147 kb on - strand, within HP15_2155at 2261.403 kb on - strand, within HP15_2155at 2261.435 kb on - strand, within HP15_2155at 2261.473 kb on - strand, within HP15_2155at 2261.520 kb on - strand, within HP15_2155at 2261.591 kb on - strand, within HP15_2155at 2261.663 kb on - strand, within HP15_2155at 2261.909 kb on - strandat 2261.920 kb on + strandat 2262.061 kb on + strand, within HP15_2156at 2262.069 kb on - strand, within HP15_2156at 2262.096 kb on + strand, within HP15_2156at 2262.251 kb on - strand, within HP15_2156at 2262.539 kb on + strand, within HP15_2156at 2262.564 kb on + strand, within HP15_2156at 2262.582 kb on + strand, within HP15_2156at 2262.715 kb on + strand, within HP15_2156at 2262.941 kb on - strandat 2263.121 kb on + strandat 2263.458 kb on - strandat 2263.477 kb on - strandat 2263.510 kb on - strand, within HP15_2157at 2263.552 kb on + strand, within HP15_2157at 2263.820 kb on - strand, within HP15_2157at 2263.822 kb on + strand, within HP15_2157at 2263.842 kb on + strand, within HP15_2157at 2263.855 kb on - strand, within HP15_2157at 2263.908 kb on + strand, within HP15_2157at 2263.921 kb on + strand, within HP15_2157

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Phenylalanine as (N)
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2,260,851 - -0.2
2,260,861 - -0.3
2,260,895 + +0.9
2,261,111 + HP15_2155 0.15 -0.6
2,261,113 + HP15_2155 0.15 +1.0
2,261,121 + HP15_2155 0.16 -2.0
2,261,147 - HP15_2155 0.19 +1.3
2,261,147 - HP15_2155 0.19 -0.2
2,261,403 - HP15_2155 0.51 -0.9
2,261,435 - HP15_2155 0.55 -0.6
2,261,473 - HP15_2155 0.60 +1.5
2,261,520 - HP15_2155 0.66 +0.2
2,261,591 - HP15_2155 0.74 -0.6
2,261,663 - HP15_2155 0.83 +1.2
2,261,909 - +0.9
2,261,920 + -0.7
2,262,061 + HP15_2156 0.19 +0.8
2,262,069 - HP15_2156 0.20 -0.4
2,262,096 + HP15_2156 0.22 +0.5
2,262,251 - HP15_2156 0.35 +0.7
2,262,539 + HP15_2156 0.58 -0.5
2,262,564 + HP15_2156 0.60 +0.5
2,262,582 + HP15_2156 0.61 +0.6
2,262,715 + HP15_2156 0.72 -0.2
2,262,941 - -0.2
2,263,121 + -0.8
2,263,458 - +1.1
2,263,477 - -0.8
2,263,510 - HP15_2157 0.11 +1.1
2,263,552 + HP15_2157 0.13 -0.5
2,263,820 - HP15_2157 0.27 +0.8
2,263,822 + HP15_2157 0.27 +0.5
2,263,842 + HP15_2157 0.28 -0.1
2,263,855 - HP15_2157 0.28 +0.9
2,263,908 + HP15_2157 0.31 +0.8
2,263,921 + HP15_2157 0.32 +1.1

Or see this region's nucleotide sequence