Experiment: L-Phenylalanine as (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_1219 and HP15_1220 are separated by 208 nucleotides HP15_1220 and HP15_1221 are separated by 56 nucleotides
HP15_1219: HP15_1219 - histone deacetylase/AcuC/AphA family protein, at 1,267,610 to 1,268,536
_1219
HP15_1220: HP15_1220 - acetyltransferase, GNAT family, at 1,268,745 to 1,271,489
_1220
HP15_1221: HP15_1221 - recombination-associated protein rdgC, at 1,271,546 to 1,272,472
_1221
Position (kb)
1268
1269
1270
1271
1272 Strain fitness (log2 ratio)
-1
0
1
2 at 1267.948 kb on + strand, within HP15_1219 at 1267.989 kb on - strand, within HP15_1219 at 1267.991 kb on + strand, within HP15_1219 at 1267.999 kb on - strand, within HP15_1219 at 1268.183 kb on + strand, within HP15_1219 at 1268.461 kb on + strand at 1268.469 kb on - strand at 1268.531 kb on + strand at 1268.771 kb on + strand at 1268.793 kb on - strand at 1268.829 kb on - strand at 1268.957 kb on + strand at 1269.087 kb on + strand, within HP15_1220 at 1269.122 kb on - strand, within HP15_1220 at 1269.197 kb on - strand, within HP15_1220 at 1269.280 kb on + strand, within HP15_1220 at 1269.355 kb on + strand, within HP15_1220 at 1269.369 kb on + strand, within HP15_1220 at 1269.369 kb on + strand, within HP15_1220 at 1269.372 kb on - strand, within HP15_1220 at 1269.576 kb on - strand, within HP15_1220 at 1269.597 kb on + strand, within HP15_1220 at 1269.600 kb on - strand, within HP15_1220 at 1269.682 kb on + strand, within HP15_1220 at 1269.749 kb on - strand, within HP15_1220 at 1269.866 kb on + strand, within HP15_1220 at 1269.967 kb on + strand, within HP15_1220 at 1270.006 kb on - strand, within HP15_1220 at 1270.036 kb on - strand, within HP15_1220 at 1270.131 kb on + strand, within HP15_1220 at 1270.211 kb on - strand, within HP15_1220 at 1270.280 kb on - strand, within HP15_1220 at 1270.310 kb on + strand, within HP15_1220 at 1270.336 kb on + strand, within HP15_1220 at 1270.366 kb on - strand, within HP15_1220 at 1270.441 kb on + strand, within HP15_1220 at 1270.459 kb on + strand, within HP15_1220 at 1270.523 kb on - strand, within HP15_1220 at 1270.619 kb on + strand, within HP15_1220 at 1270.668 kb on + strand, within HP15_1220 at 1270.676 kb on - strand, within HP15_1220 at 1270.726 kb on + strand, within HP15_1220 at 1270.748 kb on - strand, within HP15_1220 at 1270.757 kb on + strand, within HP15_1220 at 1270.813 kb on + strand, within HP15_1220 at 1271.174 kb on + strand, within HP15_1220 at 1271.303 kb on + strand at 1271.535 kb on + strand at 1271.551 kb on - strand at 1271.586 kb on + strand at 1271.597 kb on - strand at 1271.617 kb on + strand at 1271.681 kb on + strand, within HP15_1221 at 1271.751 kb on - strand, within HP15_1221 at 1271.959 kb on - strand, within HP15_1221 at 1272.006 kb on + strand, within HP15_1221 at 1272.026 kb on - strand, within HP15_1221 at 1272.064 kb on + strand, within HP15_1221 at 1272.072 kb on - strand, within HP15_1221 at 1272.191 kb on - strand, within HP15_1221 at 1272.215 kb on - strand, within HP15_1221 at 1272.376 kb on + strand, within HP15_1221
Per-strain Table
Position Strand Gene LocusTag Fraction L-Phenylalanine as (N) remove 1,267,948 + HP15_1219 0.36 +1.0 1,267,989 - HP15_1219 0.41 -0.5 1,267,991 + HP15_1219 0.41 +1.0 1,267,999 - HP15_1219 0.42 -0.3 1,268,183 + HP15_1219 0.62 +0.3 1,268,461 + +0.4 1,268,469 - +0.6 1,268,531 + +1.0 1,268,771 + -0.8 1,268,793 - +1.1 1,268,829 - -0.3 1,268,957 + +1.3 1,269,087 + HP15_1220 0.12 -0.3 1,269,122 - HP15_1220 0.14 +0.5 1,269,197 - HP15_1220 0.16 +0.5 1,269,280 + HP15_1220 0.19 -0.1 1,269,355 + HP15_1220 0.22 -0.4 1,269,369 + HP15_1220 0.23 +0.4 1,269,369 + HP15_1220 0.23 +1.1 1,269,372 - HP15_1220 0.23 -0.6 1,269,576 - HP15_1220 0.30 -0.3 1,269,597 + HP15_1220 0.31 +1.2 1,269,600 - HP15_1220 0.31 -0.6 1,269,682 + HP15_1220 0.34 +0.1 1,269,749 - HP15_1220 0.37 +0.1 1,269,866 + HP15_1220 0.41 +0.8 1,269,967 + HP15_1220 0.45 +0.3 1,270,006 - HP15_1220 0.46 -0.7 1,270,036 - HP15_1220 0.47 +1.8 1,270,131 + HP15_1220 0.50 +0.2 1,270,211 - HP15_1220 0.53 -0.2 1,270,280 - HP15_1220 0.56 +1.5 1,270,310 + HP15_1220 0.57 -0.4 1,270,336 + HP15_1220 0.58 +0.0 1,270,366 - HP15_1220 0.59 -0.0 1,270,441 + HP15_1220 0.62 +0.3 1,270,459 + HP15_1220 0.62 -0.1 1,270,523 - HP15_1220 0.65 -0.5 1,270,619 + HP15_1220 0.68 -0.5 1,270,668 + HP15_1220 0.70 -0.3 1,270,676 - HP15_1220 0.70 +0.2 1,270,726 + HP15_1220 0.72 -0.2 1,270,748 - HP15_1220 0.73 -0.2 1,270,757 + HP15_1220 0.73 +0.3 1,270,813 + HP15_1220 0.75 -0.9 1,271,174 + HP15_1220 0.88 +0.1 1,271,303 + -1.0 1,271,535 + -0.2 1,271,551 - -0.0 1,271,586 + +1.4 1,271,597 - +0.2 1,271,617 + +0.5 1,271,681 + HP15_1221 0.15 +0.0 1,271,751 - HP15_1221 0.22 -0.2 1,271,959 - HP15_1221 0.45 -0.1 1,272,006 + HP15_1221 0.50 -0.1 1,272,026 - HP15_1221 0.52 -0.1 1,272,064 + HP15_1221 0.56 +1.5 1,272,072 - HP15_1221 0.57 +1.6 1,272,191 - HP15_1221 0.70 -0.7 1,272,215 - HP15_1221 0.72 -0.2 1,272,376 + HP15_1221 0.90 -0.1
Or see this region's nucleotide sequence