Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2902

Experiment: methionine 1 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDvMF_2901 and DvMF_2902 are separated by 175 nucleotidesDvMF_2902 and DvMF_2903 are separated by 268 nucleotides DvMF_2901: DvMF_2901 - Radical SAM domain protein (RefSeq), at 3,661,234 to 3,662,313 _2901 DvMF_2902: DvMF_2902 - delta-aminolevulinic acid dehydratase (RefSeq), at 3,662,489 to 3,663,490 _2902 DvMF_2903: DvMF_2903 - Radical SAM domain protein (RefSeq), at 3,663,759 to 3,664,940 _2903 Position (kb) 3662 3663 3664Strain fitness (log2 ratio) -1 0 1at 3663.664 kb on + strandat 3663.669 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction methionine 1 mM
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3,663,664 + +1.3
3,663,669 + -0.1

Or see this region's nucleotide sequence