Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2709
Experiment: methionine 1 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | methionine 1 mM |
---|---|---|---|---|---|
remove | |||||
3,427,898 | - | DvMF_2708 | 0.27 | -1.5 | |
3,428,003 | + | DvMF_2708 | 0.36 | -1.1 | |
3,428,011 | - | DvMF_2708 | 0.36 | -1.9 | |
3,428,045 | + | DvMF_2708 | 0.39 | -0.7 | |
3,428,230 | - | DvMF_2708 | 0.54 | -0.4 | |
3,428,391 | - | DvMF_2708 | 0.67 | -1.0 | |
3,428,391 | - | DvMF_2708 | 0.67 | -1.0 | |
3,428,447 | - | DvMF_2708 | 0.72 | -1.2 | |
3,428,452 | - | DvMF_2708 | 0.72 | -1.6 | |
3,428,528 | + | DvMF_2708 | 0.78 | -0.0 | |
3,428,606 | - | DvMF_2708 | 0.84 | -0.3 | |
3,428,748 | - | -0.3 | |||
3,429,035 | - | DvMF_2709 | 0.18 | -0.1 | |
3,429,118 | - | DvMF_2709 | 0.29 | -0.1 | |
3,429,582 | - | DvMF_2709 | 0.89 | -0.2 | |
3,429,646 | + | +0.9 | |||
3,429,736 | - | +0.2 | |||
3,430,173 | + | -0.1 | |||
3,430,476 | - | DvMF_2710 | 0.21 | -0.3 | |
3,430,518 | + | DvMF_2710 | 0.23 | -0.5 |
Or see this region's nucleotide sequence