Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2286
Experiment: methionine 1 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | methionine 1 mM |
---|---|---|---|---|---|
remove | |||||
2,873,064 | - | +1.3 | |||
2,873,236 | + | flgB | DvMF_2284 | 0.49 | +1.3 |
2,873,403 | + | flgB | DvMF_2284 | 0.90 | +1.3 |
2,873,566 | - | DvMF_2285 | 0.28 | +1.5 | |
2,873,566 | - | DvMF_2285 | 0.28 | +1.3 | |
2,873,817 | - | DvMF_2285 | 0.85 | +2.1 | |
2,874,020 | - | DvMF_2286 | 0.35 | +1.3 | |
2,874,219 | - | +1.1 | |||
2,874,503 | + | -0.3 | |||
2,874,506 | - | -0.3 | |||
2,874,508 | + | -0.7 | |||
2,874,583 | + | +1.3 | |||
2,874,643 | - | +0.9 | |||
2,874,837 | + | DvMF_2287 | 0.18 | +1.1 | |
2,874,877 | - | DvMF_2287 | 0.20 | +1.0 | |
2,874,909 | - | DvMF_2287 | 0.22 | +1.0 | |
2,874,909 | - | DvMF_2287 | 0.22 | +0.7 | |
2,875,111 | - | DvMF_2287 | 0.35 | +0.6 | |
2,875,170 | + | DvMF_2287 | 0.38 | +0.8 | |
2,875,194 | + | DvMF_2287 | 0.40 | +0.6 | |
2,875,206 | - | DvMF_2287 | 0.40 | +1.0 |
Or see this region's nucleotide sequence