Experiment: methionine 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2148 and DvMF_2149 overlap by 4 nucleotides DvMF_2149 and DvMF_2150 are separated by 175 nucleotides
DvMF_2148: DvMF_2148 - multi-sensor signal transduction histidine kinase (RefSeq), at 2,675,567 to 2,677,756
_2148
DvMF_2149: DvMF_2149 - two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq), at 2,677,753 to 2,679,186
_2149
DvMF_2150: DvMF_2150 - glycosyl transferase family 2 (RefSeq), at 2,679,362 to 2,680,270
_2150
Position (kb)
2677
2678
2679
2680 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1 at 2676.754 kb on - strand, within DvMF_2148 at 2676.840 kb on + strand, within DvMF_2148 at 2676.957 kb on - strand, within DvMF_2148 at 2677.334 kb on - strand, within DvMF_2148 at 2677.467 kb on + strand, within DvMF_2148 at 2677.594 kb on - strand at 2677.669 kb on + strand at 2677.712 kb on + strand at 2677.712 kb on + strand at 2677.804 kb on + strand at 2677.832 kb on - strand at 2678.023 kb on + strand, within DvMF_2149 at 2678.088 kb on - strand, within DvMF_2149 at 2678.101 kb on - strand, within DvMF_2149 at 2678.218 kb on + strand, within DvMF_2149 at 2678.554 kb on - strand, within DvMF_2149 at 2678.821 kb on - strand, within DvMF_2149 at 2679.020 kb on + strand, within DvMF_2149 at 2679.463 kb on - strand, within DvMF_2150 at 2679.495 kb on + strand, within DvMF_2150 at 2679.503 kb on - strand, within DvMF_2150 at 2679.847 kb on + strand, within DvMF_2150 at 2679.984 kb on + strand, within DvMF_2150
Per-strain Table
Position Strand Gene LocusTag Fraction methionine 1 mM remove 2,676,754 - DvMF_2148 0.54 -0.0 2,676,840 + DvMF_2148 0.58 -0.4 2,676,957 - DvMF_2148 0.63 -1.1 2,677,334 - DvMF_2148 0.81 -0.8 2,677,467 + DvMF_2148 0.87 -0.4 2,677,594 - -0.1 2,677,669 + -0.5 2,677,712 + -0.2 2,677,712 + -0.3 2,677,804 + +0.6 2,677,832 - +0.2 2,678,023 + DvMF_2149 0.19 -0.7 2,678,088 - DvMF_2149 0.23 -0.5 2,678,101 - DvMF_2149 0.24 -0.4 2,678,218 + DvMF_2149 0.32 -5.2 2,678,554 - DvMF_2149 0.56 -0.9 2,678,821 - DvMF_2149 0.74 -0.4 2,679,020 + DvMF_2149 0.88 -0.9 2,679,463 - DvMF_2150 0.11 -0.0 2,679,495 + DvMF_2150 0.15 +0.0 2,679,503 - DvMF_2150 0.16 +0.1 2,679,847 + DvMF_2150 0.53 -0.4 2,679,984 + DvMF_2150 0.68 +1.3
Or see this region's nucleotide sequence