Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1798
Experiment: methionine 1 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | methionine 1 mM |
---|---|---|---|---|---|
remove | |||||
2,197,855 | - | DvMF_1797 | 0.59 | -0.5 | |
2,197,928 | - | DvMF_1797 | 0.62 | -0.1 | |
2,197,933 | + | DvMF_1797 | 0.63 | -0.0 | |
2,197,982 | - | DvMF_1797 | 0.65 | -0.2 | |
2,198,080 | + | DvMF_1797 | 0.70 | -0.6 | |
2,198,399 | + | DvMF_1797 | 0.86 | -0.6 | |
2,198,464 | + | DvMF_1797 | 0.90 | -0.8 | |
2,198,805 | - | -0.8 | |||
2,198,839 | + | -1.2 | |||
2,198,847 | - | -1.2 | |||
2,198,847 | - | -1.2 | |||
2,198,961 | + | DvMF_1798 | 0.17 | -1.1 | |
2,198,961 | + | DvMF_1798 | 0.17 | -1.3 | |
2,198,969 | - | DvMF_1798 | 0.18 | -0.3 | |
2,198,986 | + | DvMF_1798 | 0.19 | -1.1 | |
2,198,986 | + | DvMF_1798 | 0.19 | +0.3 | |
2,198,994 | - | DvMF_1798 | 0.20 | -1.3 | |
2,199,045 | + | DvMF_1798 | 0.24 | -1.4 | |
2,199,093 | + | DvMF_1798 | 0.27 | -0.0 | |
2,199,149 | + | DvMF_1798 | 0.32 | -0.9 | |
2,199,205 | - | DvMF_1798 | 0.36 | -0.7 | |
2,199,369 | - | DvMF_1798 | 0.48 | -0.4 | |
2,199,369 | - | DvMF_1798 | 0.48 | -0.5 | |
2,199,391 | - | DvMF_1798 | 0.50 | -0.7 | |
2,199,419 | - | DvMF_1798 | 0.52 | -1.1 | |
2,199,491 | - | DvMF_1798 | 0.58 | -1.4 | |
2,199,659 | + | DvMF_1798 | 0.71 | -0.8 | |
2,200,196 | + | -0.6 | |||
2,200,292 | + | -0.7 |
Or see this region's nucleotide sequence