Experiment: D-Maltose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shewana3_3623 and Shewana3_3624 are separated by 655 nucleotides Shewana3_3624 and Shewana3_3626 are separated by 268 nucleotides
Shewana3_3623: Shewana3_3623 - hypothetical protein (RefSeq), at 4,350,651 to 4,351,577
_3623
Shewana3_3624: Shewana3_3624 - no description, at 4,352,233 to 4,353,024
_3624
Shewana3_3626: Shewana3_3626 - hypothetical protein (RefSeq), at 4,353,293 to 4,354,003
_3626
Position (kb) 4352
4353
4354 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 4351.240 kb on - strand, within Shewana3_3623 at 4351.240 kb on - strand, within Shewana3_3623 at 4351.240 kb on - strand, within Shewana3_3623 at 4351.240 kb on - strand, within Shewana3_3623 at 4351.240 kb on - strand, within Shewana3_3623 at 4351.240 kb on - strand, within Shewana3_3623 at 4351.240 kb on - strand, within Shewana3_3623 at 4351.240 kb on - strand, within Shewana3_3623 at 4351.240 kb on - strand, within Shewana3_3623 at 4351.240 kb on - strand, within Shewana3_3623 at 4351.240 kb on - strand, within Shewana3_3623 at 4351.240 kb on - strand, within Shewana3_3623 at 4351.242 kb on + strand, within Shewana3_3623 at 4351.250 kb on - strand, within Shewana3_3623 at 4351.250 kb on - strand, within Shewana3_3623 at 4351.253 kb on - strand, within Shewana3_3623 at 4351.253 kb on - strand, within Shewana3_3623 at 4351.262 kb on + strand, within Shewana3_3623 at 4351.262 kb on - strand, within Shewana3_3623 at 4351.269 kb on + strand, within Shewana3_3623 at 4351.299 kb on - strand, within Shewana3_3623 at 4351.324 kb on + strand, within Shewana3_3623 at 4351.341 kb on - strand, within Shewana3_3623 at 4351.352 kb on + strand, within Shewana3_3623 at 4351.352 kb on - strand, within Shewana3_3623 at 4351.393 kb on + strand, within Shewana3_3623 at 4351.393 kb on + strand, within Shewana3_3623 at 4351.393 kb on + strand, within Shewana3_3623 at 4351.393 kb on + strand, within Shewana3_3623 at 4351.393 kb on + strand, within Shewana3_3623 at 4351.393 kb on + strand, within Shewana3_3623 at 4351.393 kb on + strand, within Shewana3_3623 at 4351.401 kb on - strand, within Shewana3_3623 at 4351.401 kb on - strand, within Shewana3_3623 at 4351.401 kb on - strand, within Shewana3_3623 at 4351.401 kb on - strand, within Shewana3_3623 at 4351.401 kb on - strand, within Shewana3_3623 at 4351.401 kb on - strand, within Shewana3_3623 at 4351.401 kb on - strand, within Shewana3_3623 at 4351.404 kb on + strand, within Shewana3_3623 at 4351.404 kb on + strand, within Shewana3_3623 at 4351.404 kb on + strand, within Shewana3_3623 at 4351.412 kb on - strand, within Shewana3_3623 at 4351.437 kb on + strand, within Shewana3_3623 at 4351.439 kb on + strand, within Shewana3_3623 at 4351.459 kb on + strand, within Shewana3_3623 at 4351.459 kb on + strand, within Shewana3_3623 at 4351.492 kb on + strand at 4351.509 kb on + strand at 4351.509 kb on + strand at 4351.509 kb on + strand at 4351.509 kb on + strand at 4351.509 kb on + strand at 4351.509 kb on + strand at 4351.509 kb on + strand at 4351.509 kb on + strand at 4351.509 kb on + strand at 4351.509 kb on + strand at 4351.509 kb on + strand at 4351.510 kb on + strand at 4351.517 kb on - strand at 4351.517 kb on - strand at 4351.517 kb on - strand at 4351.517 kb on - strand at 4351.517 kb on - strand at 4351.517 kb on - strand at 4351.517 kb on - strand at 4351.517 kb on - strand at 4351.518 kb on - strand at 4351.518 kb on - strand at 4351.587 kb on - strand at 4351.619 kb on + strand at 4351.625 kb on + strand at 4351.681 kb on - strand at 4351.681 kb on - strand at 4351.683 kb on + strand at 4351.693 kb on + strand at 4351.697 kb on + strand at 4351.700 kb on + strand at 4351.700 kb on + strand at 4351.702 kb on + strand at 4351.702 kb on + strand at 4351.702 kb on + strand at 4351.703 kb on - strand at 4351.710 kb on - strand at 4351.710 kb on - strand at 4351.710 kb on - strand at 4351.712 kb on + strand at 4351.742 kb on - strand at 4351.747 kb on + strand at 4351.748 kb on + strand at 4351.748 kb on + strand at 4351.755 kb on - strand at 4351.809 kb on + strand at 4351.809 kb on + strand at 4351.809 kb on + strand at 4351.809 kb on + strand at 4351.809 kb on + strand at 4351.811 kb on + strand at 4351.817 kb on - strand at 4351.819 kb on - strand at 4351.833 kb on - strand at 4351.845 kb on - strand at 4351.855 kb on - strand at 4351.868 kb on - strand at 4351.949 kb on + strand at 4351.957 kb on + strand at 4351.957 kb on + strand at 4351.957 kb on + strand at 4351.957 kb on + strand at 4352.191 kb on - strand at 4352.195 kb on - strand at 4352.239 kb on - strand at 4352.239 kb on - strand at 4352.342 kb on + strand, within Shewana3_3624 at 4352.377 kb on + strand, within Shewana3_3624 at 4352.394 kb on + strand, within Shewana3_3624 at 4352.406 kb on + strand, within Shewana3_3624 at 4352.445 kb on - strand, within Shewana3_3624 at 4352.515 kb on - strand, within Shewana3_3624 at 4352.660 kb on + strand, within Shewana3_3624 at 4352.755 kb on - strand, within Shewana3_3624 at 4352.777 kb on + strand, within Shewana3_3624 at 4352.785 kb on + strand, within Shewana3_3624 at 4352.800 kb on - strand, within Shewana3_3624 at 4352.889 kb on - strand, within Shewana3_3624 at 4352.997 kb on + strand at 4353.057 kb on - strand at 4353.067 kb on - strand at 4353.192 kb on - strand at 4353.214 kb on - strand at 4353.274 kb on - strand at 4353.473 kb on + strand, within Shewana3_3626 at 4353.589 kb on + strand, within Shewana3_3626 at 4353.597 kb on - strand, within Shewana3_3626 at 4353.602 kb on + strand, within Shewana3_3626 at 4353.641 kb on - strand, within Shewana3_3626 at 4353.669 kb on + strand, within Shewana3_3626 at 4353.726 kb on - strand, within Shewana3_3626 at 4353.772 kb on - strand, within Shewana3_3626 at 4353.801 kb on + strand, within Shewana3_3626 at 4353.801 kb on + strand, within Shewana3_3626 at 4353.900 kb on - strand, within Shewana3_3626
Per-strain Table
Position Strand Gene LocusTag Fraction D-Maltose (C) remove 4,351,240 - Shewana3_3623 0.64 +0.7 4,351,240 - Shewana3_3623 0.64 +0.5 4,351,240 - Shewana3_3623 0.64 +0.6 4,351,240 - Shewana3_3623 0.64 +0.5 4,351,240 - Shewana3_3623 0.64 +0.3 4,351,240 - Shewana3_3623 0.64 -1.2 4,351,240 - Shewana3_3623 0.64 -2.1 4,351,240 - Shewana3_3623 0.64 +0.5 4,351,240 - Shewana3_3623 0.64 -0.1 4,351,240 - Shewana3_3623 0.64 +0.9 4,351,240 - Shewana3_3623 0.64 +0.9 4,351,240 - Shewana3_3623 0.64 +0.4 4,351,242 + Shewana3_3623 0.64 -1.3 4,351,250 - Shewana3_3623 0.65 +0.3 4,351,250 - Shewana3_3623 0.65 +0.6 4,351,253 - Shewana3_3623 0.65 +0.1 4,351,253 - Shewana3_3623 0.65 -1.2 4,351,262 + Shewana3_3623 0.66 -1.0 4,351,262 - Shewana3_3623 0.66 -0.3 4,351,269 + Shewana3_3623 0.67 -0.3 4,351,299 - Shewana3_3623 0.70 -0.3 4,351,324 + Shewana3_3623 0.73 +0.3 4,351,341 - Shewana3_3623 0.74 +0.5 4,351,352 + Shewana3_3623 0.76 +0.9 4,351,352 - Shewana3_3623 0.76 -0.8 4,351,393 + Shewana3_3623 0.80 +0.8 4,351,393 + Shewana3_3623 0.80 +0.4 4,351,393 + Shewana3_3623 0.80 -0.1 4,351,393 + Shewana3_3623 0.80 +0.3 4,351,393 + Shewana3_3623 0.80 -2.0 4,351,393 + Shewana3_3623 0.80 +1.1 4,351,393 + Shewana3_3623 0.80 +0.4 4,351,401 - Shewana3_3623 0.81 +0.8 4,351,401 - Shewana3_3623 0.81 +0.3 4,351,401 - Shewana3_3623 0.81 -0.3 4,351,401 - Shewana3_3623 0.81 -0.6 4,351,401 - Shewana3_3623 0.81 +0.5 4,351,401 - Shewana3_3623 0.81 +0.3 4,351,401 - Shewana3_3623 0.81 +0.5 4,351,404 + Shewana3_3623 0.81 +0.4 4,351,404 + Shewana3_3623 0.81 +0.6 4,351,404 + Shewana3_3623 0.81 -2.3 4,351,412 - Shewana3_3623 0.82 +0.5 4,351,437 + Shewana3_3623 0.85 -0.1 4,351,439 + Shewana3_3623 0.85 -2.1 4,351,459 + Shewana3_3623 0.87 -0.5 4,351,459 + Shewana3_3623 0.87 +0.7 4,351,492 + +0.6 4,351,509 + +0.6 4,351,509 + +0.4 4,351,509 + -1.0 4,351,509 + +0.4 4,351,509 + -0.5 4,351,509 + -0.6 4,351,509 + +0.3 4,351,509 + +0.3 4,351,509 + -0.3 4,351,509 + -1.4 4,351,509 + +1.0 4,351,510 + +0.4 4,351,517 - -0.1 4,351,517 - -0.1 4,351,517 - +0.3 4,351,517 - +0.4 4,351,517 - +0.2 4,351,517 - -0.9 4,351,517 - +0.6 4,351,517 - +0.4 4,351,518 - -1.3 4,351,518 - -1.2 4,351,587 - -0.2 4,351,619 + +0.3 4,351,625 + -1.4 4,351,681 - -3.3 4,351,681 - +0.3 4,351,683 + -0.2 4,351,693 + +0.6 4,351,697 + +0.0 4,351,700 + -0.8 4,351,700 + -1.0 4,351,702 + -1.2 4,351,702 + +0.4 4,351,702 + +0.1 4,351,703 - +0.5 4,351,710 - -1.1 4,351,710 - -1.3 4,351,710 - -0.2 4,351,712 + -1.1 4,351,742 - -0.8 4,351,747 + +0.1 4,351,748 + +0.3 4,351,748 + +0.9 4,351,755 - -1.1 4,351,809 + +1.1 4,351,809 + -0.8 4,351,809 + -1.1 4,351,809 + +0.1 4,351,809 + +0.6 4,351,811 + +1.2 4,351,817 - +1.1 4,351,819 - -1.3 4,351,833 - -1.0 4,351,845 - +0.3 4,351,855 - -1.2 4,351,868 - -0.9 4,351,949 + -0.0 4,351,957 + -3.1 4,351,957 + +1.0 4,351,957 + -0.5 4,351,957 + +0.1 4,352,191 - +0.6 4,352,195 - +0.1 4,352,239 - +0.6 4,352,239 - -0.6 4,352,342 + Shewana3_3624 0.14 +0.0 4,352,377 + Shewana3_3624 0.18 +2.5 4,352,394 + Shewana3_3624 0.20 -0.3 4,352,406 + Shewana3_3624 0.22 -0.1 4,352,445 - Shewana3_3624 0.27 +0.4 4,352,515 - Shewana3_3624 0.36 +0.2 4,352,660 + Shewana3_3624 0.54 -1.0 4,352,755 - Shewana3_3624 0.66 -1.1 4,352,777 + Shewana3_3624 0.69 +0.3 4,352,785 + Shewana3_3624 0.70 -1.0 4,352,800 - Shewana3_3624 0.72 -1.3 4,352,889 - Shewana3_3624 0.83 +0.2 4,352,997 + -1.0 4,353,057 - +0.6 4,353,067 - +0.4 4,353,192 - +0.0 4,353,214 - +0.4 4,353,274 - -0.8 4,353,473 + Shewana3_3626 0.25 -0.1 4,353,589 + Shewana3_3626 0.42 +0.6 4,353,597 - Shewana3_3626 0.43 +0.4 4,353,602 + Shewana3_3626 0.43 -1.8 4,353,641 - Shewana3_3626 0.49 +0.8 4,353,669 + Shewana3_3626 0.53 +0.4 4,353,726 - Shewana3_3626 0.61 +0.5 4,353,772 - Shewana3_3626 0.67 +0.1 4,353,801 + Shewana3_3626 0.71 -0.1 4,353,801 + Shewana3_3626 0.71 +0.5 4,353,900 - Shewana3_3626 0.85 +0.0
Or see this region's nucleotide sequence