Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1863

Experiment: D-Maltose (C)

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntShewana3_1862 and pheS are separated by 434 nucleotidespheS and pheT are separated by 14 nucleotides Shewana3_1862: Shewana3_1862 - methyl-accepting chemotaxis sensory transducer (RefSeq), at 2,205,283 to 2,206,800 _1862 Shewana3_1863: pheS - phenylalanyl-tRNA synthetase subunit alpha (RefSeq), at 2,207,235 to 2,208,254 pheS Shewana3_1864: pheT - phenylalanyl-tRNA synthetase subunit beta (RefSeq), at 2,208,269 to 2,210,656 pheT Position (kb) 2207 2208 2209Strain fitness (log2 ratio) -1 0 1 2at 2207.073 kb on + strandat 2208.257 kb on + strand

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction D-Maltose (C)
remove
2,207,073 + +0.9
2,208,257 + +2.1

Or see this region's nucleotide sequence