Experiment: D-Maltose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shewana3_0651 and Shewana3_0652 are separated by 558 nucleotides Shewana3_0652 and Shewana3_0653 are separated by 1 nucleotides
Shewana3_0651: Shewana3_0651 - hypothetical protein (RefSeq), at 770,524 to 770,958
_0651
Shewana3_0652: Shewana3_0652 - aspartate kinase III (RefSeq), at 771,517 to 772,872
_0652
Shewana3_0653: Shewana3_0653 - succinylglutamate desuccinylase/aspartoacylase (RefSeq), at 772,874 to 773,989
_0653
Position (kb) 771
772
773 Strain fitness (log2 ratio) -2
-1
0
1 at 770.636 kb on + strand, within Shewana3_0651 at 770.646 kb on + strand, within Shewana3_0651 at 770.897 kb on + strand, within Shewana3_0651 at 770.897 kb on + strand, within Shewana3_0651 at 770.917 kb on + strand at 770.997 kb on - strand at 771.004 kb on + strand at 771.248 kb on + strand at 771.279 kb on - strand at 771.400 kb on - strand at 771.498 kb on - strand at 771.568 kb on + strand at 771.658 kb on + strand, within Shewana3_0652 at 771.744 kb on - strand, within Shewana3_0652 at 771.853 kb on - strand, within Shewana3_0652 at 771.876 kb on + strand, within Shewana3_0652 at 771.949 kb on + strand, within Shewana3_0652 at 772.180 kb on + strand, within Shewana3_0652 at 772.400 kb on - strand, within Shewana3_0652 at 772.436 kb on + strand, within Shewana3_0652 at 772.670 kb on + strand, within Shewana3_0652 at 772.732 kb on + strand, within Shewana3_0652 at 772.749 kb on - strand at 772.865 kb on - strand at 772.925 kb on + strand at 772.982 kb on - strand at 773.112 kb on + strand, within Shewana3_0653 at 773.262 kb on - strand, within Shewana3_0653 at 773.354 kb on + strand, within Shewana3_0653 at 773.355 kb on - strand, within Shewana3_0653 at 773.429 kb on + strand, within Shewana3_0653 at 773.526 kb on - strand, within Shewana3_0653 at 773.595 kb on + strand, within Shewana3_0653 at 773.733 kb on + strand, within Shewana3_0653 at 773.784 kb on - strand, within Shewana3_0653 at 773.859 kb on - strand, within Shewana3_0653
Per-strain Table
Position Strand Gene LocusTag Fraction D-Maltose (C) remove 770,636 + Shewana3_0651 0.26 -0.7 770,646 + Shewana3_0651 0.28 -1.1 770,897 + Shewana3_0651 0.86 -0.0 770,897 + Shewana3_0651 0.86 -0.0 770,917 + -0.9 770,997 - -1.5 771,004 + +0.6 771,248 + -1.3 771,279 - -1.2 771,400 - -1.5 771,498 - -1.9 771,568 + -2.2 771,658 + Shewana3_0652 0.10 -1.8 771,744 - Shewana3_0652 0.17 -2.0 771,853 - Shewana3_0652 0.25 -1.1 771,876 + Shewana3_0652 0.26 -0.6 771,949 + Shewana3_0652 0.32 -1.6 772,180 + Shewana3_0652 0.49 -1.9 772,400 - Shewana3_0652 0.65 -1.3 772,436 + Shewana3_0652 0.68 -2.6 772,670 + Shewana3_0652 0.85 -1.2 772,732 + Shewana3_0652 0.90 -1.1 772,749 - -0.1 772,865 - +0.2 772,925 + +0.4 772,982 - +0.1 773,112 + Shewana3_0653 0.21 +0.2 773,262 - Shewana3_0653 0.35 +0.7 773,354 + Shewana3_0653 0.43 +0.3 773,355 - Shewana3_0653 0.43 +0.4 773,429 + Shewana3_0653 0.50 -0.0 773,526 - Shewana3_0653 0.58 -0.9 773,595 + Shewana3_0653 0.65 +0.9 773,733 + Shewana3_0653 0.77 -1.3 773,784 - Shewana3_0653 0.82 -0.1 773,859 - Shewana3_0653 0.88 -0.9
Or see this region's nucleotide sequence