Experiment: copper (II) chloride 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shew_0486 and Shew_0487 are separated by 27 nucleotides Shew_0487 and Shew_0488 are separated by 10 nucleotides Shew_0488 and Shew_0489 are separated by 277 nucleotides Shew_0489 and Shew_0490 are separated by 118 nucleotides
Shew_0486: Shew_0486 - permease (RefSeq), at 543,518 to 544,534
_0486
Shew_0487: Shew_0487 - redox-active disulfide protein 2 (RefSeq), at 544,562 to 544,810
_0487
Shew_0488: Shew_0488 - ArsR family transcriptional regulator (RefSeq), at 544,821 to 545,225
_0488
Shew_0489: Shew_0489 - hypothetical protein (RefSeq), at 545,503 to 545,931
_0489
Shew_0490: Shew_0490 - peptidase S9 prolyl oligopeptidase (RefSeq), at 546,050 to 548,077
_0490
Position (kb) 545
546 Strain fitness (log2 ratio) -1
0
1
2 at 544.542 kb on + strand at 544.542 kb on + strand at 544.542 kb on + strand at 544.542 kb on + strand at 544.542 kb on + strand at 544.550 kb on - strand at 544.550 kb on - strand at 544.550 kb on - strand at 544.631 kb on + strand, within Shew_0487 at 544.835 kb on + strand at 544.942 kb on - strand, within Shew_0488 at 545.058 kb on - strand, within Shew_0488 at 545.394 kb on + strand at 545.465 kb on + strand at 545.520 kb on + strand at 545.550 kb on + strand, within Shew_0489 at 545.550 kb on + strand, within Shew_0489 at 545.588 kb on + strand, within Shew_0489 at 545.855 kb on + strand, within Shew_0489 at 545.991 kb on + strand at 546.240 kb on + strand at 546.344 kb on - strand, within Shew_0490 at 546.378 kb on - strand, within Shew_0490 at 546.535 kb on + strand, within Shew_0490 at 546.543 kb on - strand, within Shew_0490 at 546.550 kb on + strand, within Shew_0490 at 546.751 kb on - strand, within Shew_0490
Per-strain Table
Position Strand Gene LocusTag Fraction copper (II) chloride 0.5 mM remove 544,542 + -0.2 544,542 + -0.0 544,542 + -0.0 544,542 + +0.9 544,542 + -0.9 544,550 - -0.7 544,550 - +0.2 544,550 - +0.4 544,631 + Shew_0487 0.28 -0.5 544,835 + +0.1 544,942 - Shew_0488 0.30 +0.2 545,058 - Shew_0488 0.59 +0.3 545,394 + +0.0 545,465 + +0.3 545,520 + +0.3 545,550 + Shew_0489 0.11 -1.4 545,550 + Shew_0489 0.11 +0.2 545,588 + Shew_0489 0.20 -0.9 545,855 + Shew_0489 0.82 -0.6 545,991 + +2.3 546,240 + -0.0 546,344 - Shew_0490 0.14 +0.2 546,378 - Shew_0490 0.16 +0.4 546,535 + Shew_0490 0.24 +0.0 546,543 - Shew_0490 0.24 -0.0 546,550 + Shew_0490 0.25 +0.1 546,751 - Shew_0490 0.35 +0.4
Or see this region's nucleotide sequence