Experiment: Defined MoLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt prfC and DvMF_2373 are separated by 269 nucleotides DvMF_2373 and DvMF_2374 overlap by 8 nucleotides
DvMF_2372: prfC - peptide chain release factor 3 (RefSeq), at 2,992,478 to 2,994,067
prfC
DvMF_2373: DvMF_2373 - multi-sensor hybrid histidine kinase (RefSeq), at 2,994,337 to 2,998,836
_2373
DvMF_2374: DvMF_2374 - oxygen-independent coproporphyrinogen III oxidase (RefSeq), at 2,998,829 to 3,000,175
_2374
Position (kb)
2994
2995
2996
2997
2998
2999 Strain fitness (log2 ratio)
-1
0
1 at 2993.425 kb on - strand, within prfC at 2993.543 kb on - strand, within prfC at 2993.632 kb on - strand, within prfC at 2993.758 kb on - strand, within prfC at 2994.087 kb on - strand at 2994.342 kb on - strand at 2994.476 kb on + strand at 2994.694 kb on + strand at 2994.757 kb on + strand at 2994.897 kb on + strand, within DvMF_2373 at 2995.213 kb on + strand, within DvMF_2373 at 2995.318 kb on - strand, within DvMF_2373 at 2995.369 kb on - strand, within DvMF_2373 at 2995.430 kb on + strand, within DvMF_2373 at 2995.495 kb on + strand, within DvMF_2373 at 2995.842 kb on - strand, within DvMF_2373 at 2995.959 kb on - strand, within DvMF_2373 at 2995.981 kb on - strand, within DvMF_2373 at 2995.983 kb on - strand, within DvMF_2373 at 2996.375 kb on + strand, within DvMF_2373 at 2996.400 kb on + strand, within DvMF_2373 at 2996.477 kb on + strand, within DvMF_2373 at 2996.493 kb on + strand, within DvMF_2373 at 2996.750 kb on + strand, within DvMF_2373 at 2996.846 kb on + strand, within DvMF_2373 at 2997.073 kb on + strand, within DvMF_2373 at 2997.075 kb on - strand, within DvMF_2373 at 2997.081 kb on - strand, within DvMF_2373 at 2997.081 kb on - strand, within DvMF_2373 at 2997.081 kb on - strand, within DvMF_2373 at 2997.175 kb on - strand, within DvMF_2373 at 2997.233 kb on + strand, within DvMF_2373 at 2997.269 kb on - strand, within DvMF_2373 at 2997.293 kb on - strand, within DvMF_2373 at 2997.295 kb on - strand, within DvMF_2373 at 2997.400 kb on + strand, within DvMF_2373 at 2997.522 kb on + strand, within DvMF_2373 at 2997.687 kb on - strand, within DvMF_2373 at 2997.756 kb on + strand, within DvMF_2373 at 2997.764 kb on - strand, within DvMF_2373 at 2997.938 kb on - strand, within DvMF_2373 at 2997.986 kb on + strand, within DvMF_2373 at 2998.109 kb on - strand, within DvMF_2373 at 2998.195 kb on + strand, within DvMF_2373 at 2998.429 kb on - strand at 2998.528 kb on - strand at 2998.667 kb on - strand at 2998.788 kb on + strand at 2998.850 kb on + strand at 2999.096 kb on + strand, within DvMF_2374 at 2999.205 kb on + strand, within DvMF_2374 at 2999.207 kb on - strand, within DvMF_2374 at 2999.213 kb on - strand, within DvMF_2374 at 2999.593 kb on + strand, within DvMF_2374 at 2999.599 kb on + strand, within DvMF_2374 at 2999.680 kb on + strand, within DvMF_2374 at 2999.699 kb on - strand, within DvMF_2374 at 2999.699 kb on - strand, within DvMF_2374
Per-strain Table
Position Strand Gene LocusTag Fraction Defined MoLS4 remove 2,993,425 - prfC DvMF_2372 0.60 -0.5 2,993,543 - prfC DvMF_2372 0.67 -0.4 2,993,632 - prfC DvMF_2372 0.73 -0.3 2,993,758 - prfC DvMF_2372 0.81 +0.5 2,994,087 - -0.4 2,994,342 - +0.1 2,994,476 + -0.4 2,994,694 + +0.1 2,994,757 + -0.5 2,994,897 + DvMF_2373 0.12 -0.1 2,995,213 + DvMF_2373 0.19 +0.5 2,995,318 - DvMF_2373 0.22 -0.3 2,995,369 - DvMF_2373 0.23 +0.0 2,995,430 + DvMF_2373 0.24 -0.2 2,995,495 + DvMF_2373 0.26 +0.3 2,995,842 - DvMF_2373 0.33 -0.4 2,995,959 - DvMF_2373 0.36 +0.1 2,995,981 - DvMF_2373 0.37 -0.3 2,995,983 - DvMF_2373 0.37 +0.2 2,996,375 + DvMF_2373 0.45 -0.2 2,996,400 + DvMF_2373 0.46 -0.8 2,996,477 + DvMF_2373 0.48 -0.0 2,996,493 + DvMF_2373 0.48 -0.7 2,996,750 + DvMF_2373 0.54 -0.2 2,996,846 + DvMF_2373 0.56 -0.8 2,997,073 + DvMF_2373 0.61 -0.2 2,997,075 - DvMF_2373 0.61 -0.8 2,997,081 - DvMF_2373 0.61 -0.4 2,997,081 - DvMF_2373 0.61 -0.4 2,997,081 - DvMF_2373 0.61 -0.3 2,997,175 - DvMF_2373 0.63 -0.2 2,997,233 + DvMF_2373 0.64 -0.3 2,997,269 - DvMF_2373 0.65 -1.0 2,997,293 - DvMF_2373 0.66 -0.2 2,997,295 - DvMF_2373 0.66 +0.3 2,997,400 + DvMF_2373 0.68 -0.3 2,997,522 + DvMF_2373 0.71 +0.4 2,997,687 - DvMF_2373 0.74 -0.1 2,997,756 + DvMF_2373 0.76 -0.1 2,997,764 - DvMF_2373 0.76 -0.3 2,997,938 - DvMF_2373 0.80 -0.3 2,997,986 + DvMF_2373 0.81 -0.2 2,998,109 - DvMF_2373 0.84 -0.2 2,998,195 + DvMF_2373 0.86 -0.1 2,998,429 - +0.1 2,998,528 - +0.3 2,998,667 - -0.3 2,998,788 + -0.4 2,998,850 + +0.1 2,999,096 + DvMF_2374 0.20 -0.4 2,999,205 + DvMF_2374 0.28 -0.6 2,999,207 - DvMF_2374 0.28 -0.4 2,999,213 - DvMF_2374 0.29 -0.3 2,999,593 + DvMF_2374 0.57 -0.6 2,999,599 + DvMF_2374 0.57 -0.4 2,999,680 + DvMF_2374 0.63 -0.3 2,999,699 - DvMF_2374 0.65 +0.3 2,999,699 - DvMF_2374 0.65 +0.2
Or see this region's nucleotide sequence