Experiment: Defined MoLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1846 and DvMF_1847 overlap by 8 nucleotides DvMF_1847 and DvMF_1848 are separated by 8 nucleotides DvMF_1848 and DvMF_1849 overlap by 4 nucleotides DvMF_1849 and DvMF_1850 are separated by 15 nucleotides
DvMF_1846: DvMF_1846 - UDP-N-acetylglucosamine 2-epimerase (RefSeq), at 2,257,737 to 2,258,963
_1846
DvMF_1847: DvMF_1847 - polysaccharide deacetylase (RefSeq), at 2,258,956 to 2,259,897
_1847
DvMF_1848: DvMF_1848 - hypothetical protein (RefSeq), at 2,259,906 to 2,261,060
_1848
DvMF_1849: DvMF_1849 - Radical SAM domain protein (RefSeq), at 2,261,057 to 2,261,989
_1849
DvMF_1850: DvMF_1850 - Capsule polysaccharide biosynthesis protein (RefSeq), at 2,262,005 to 2,263,510
_1850
Position (kb)
2259
2260
2261
2262 Strain fitness (log2 ratio)
-1
0
1 at 2259.039 kb on - strand at 2259.046 kb on - strand at 2259.345 kb on + strand, within DvMF_1847 at 2259.348 kb on - strand, within DvMF_1847 at 2259.628 kb on - strand, within DvMF_1847 at 2259.714 kb on + strand, within DvMF_1847 at 2259.757 kb on + strand, within DvMF_1847 at 2259.803 kb on + strand at 2259.911 kb on + strand at 2259.947 kb on - strand at 2260.152 kb on + strand, within DvMF_1848 at 2260.256 kb on + strand, within DvMF_1848 at 2260.438 kb on - strand, within DvMF_1848 at 2260.593 kb on + strand, within DvMF_1848 at 2260.593 kb on + strand, within DvMF_1848 at 2260.616 kb on + strand, within DvMF_1848 at 2260.679 kb on - strand, within DvMF_1848 at 2260.681 kb on + strand, within DvMF_1848 at 2260.681 kb on + strand, within DvMF_1848 at 2260.703 kb on + strand, within DvMF_1848 at 2260.704 kb on - strand, within DvMF_1848 at 2260.890 kb on - strand, within DvMF_1848 at 2261.363 kb on + strand, within DvMF_1849 at 2261.363 kb on - strand, within DvMF_1849 at 2261.806 kb on + strand, within DvMF_1849 at 2261.927 kb on + strand at 2261.964 kb on + strand at 2261.972 kb on - strand at 2261.972 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Defined MoLS4 remove 2,259,039 - -0.5 2,259,046 - -0.4 2,259,345 + DvMF_1847 0.41 -0.2 2,259,348 - DvMF_1847 0.42 -0.5 2,259,628 - DvMF_1847 0.71 -0.4 2,259,714 + DvMF_1847 0.80 -0.7 2,259,757 + DvMF_1847 0.85 -0.8 2,259,803 + -0.2 2,259,911 + -0.5 2,259,947 - -0.2 2,260,152 + DvMF_1848 0.21 -0.8 2,260,256 + DvMF_1848 0.30 -0.6 2,260,438 - DvMF_1848 0.46 -0.8 2,260,593 + DvMF_1848 0.59 -0.1 2,260,593 + DvMF_1848 0.59 -0.6 2,260,616 + DvMF_1848 0.61 -0.3 2,260,679 - DvMF_1848 0.67 -1.1 2,260,681 + DvMF_1848 0.67 -1.0 2,260,681 + DvMF_1848 0.67 -0.7 2,260,703 + DvMF_1848 0.69 -0.7 2,260,704 - DvMF_1848 0.69 -0.7 2,260,890 - DvMF_1848 0.85 -0.8 2,261,363 + DvMF_1849 0.33 -0.6 2,261,363 - DvMF_1849 0.33 -0.7 2,261,806 + DvMF_1849 0.80 -0.8 2,261,927 + -0.9 2,261,964 + -0.3 2,261,972 - -0.6 2,261,972 - -0.4
Or see this region's nucleotide sequence