Experiment: Defined MoLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1756 and DvMF_1757 are separated by 252 nucleotides DvMF_1757 and DvMF_1758 are separated by 288 nucleotides DvMF_1758 and DvMF_1759 are separated by 216 nucleotides
DvMF_1756: DvMF_1756 - hypothetical protein (RefSeq), at 2,145,131 to 2,145,946
_1756
DvMF_1757: DvMF_1757 - hypothetical protein (RefSeq), at 2,146,199 to 2,146,348
_1757
DvMF_1758: DvMF_1758 - UvrD/REP helicase (RefSeq), at 2,146,637 to 2,150,371
_1758
DvMF_1759: DvMF_1759 - hypothetical protein (RefSeq), at 2,150,588 to 2,151,784
_1759
Position (kb)
2146
2147
2148
2149
2150
2151 Strain fitness (log2 ratio)
-2
-1
0
1 at 2145.822 kb on - strand, within DvMF_1756 at 2145.822 kb on - strand, within DvMF_1756 at 2145.897 kb on + strand at 2145.950 kb on - strand at 2146.134 kb on - strand at 2146.155 kb on - strand at 2146.190 kb on - strand at 2146.425 kb on - strand at 2146.541 kb on + strand at 2146.560 kb on - strand at 2146.609 kb on + strand at 2146.949 kb on - strand at 2146.949 kb on - strand at 2147.117 kb on - strand, within DvMF_1758 at 2147.117 kb on - strand, within DvMF_1758 at 2147.358 kb on + strand, within DvMF_1758 at 2147.583 kb on + strand, within DvMF_1758 at 2148.011 kb on + strand, within DvMF_1758 at 2148.125 kb on - strand, within DvMF_1758 at 2148.459 kb on + strand, within DvMF_1758 at 2148.472 kb on + strand, within DvMF_1758 at 2148.668 kb on - strand, within DvMF_1758 at 2148.687 kb on + strand, within DvMF_1758 at 2148.975 kb on + strand, within DvMF_1758 at 2148.989 kb on + strand, within DvMF_1758 at 2149.048 kb on + strand, within DvMF_1758 at 2149.171 kb on - strand, within DvMF_1758 at 2149.196 kb on + strand, within DvMF_1758 at 2149.606 kb on - strand, within DvMF_1758 at 2149.614 kb on - strand, within DvMF_1758 at 2149.860 kb on + strand, within DvMF_1758 at 2149.860 kb on + strand, within DvMF_1758 at 2150.090 kb on + strand at 2150.301 kb on + strand at 2150.363 kb on - strand at 2150.442 kb on + strand at 2150.477 kb on - strand at 2150.735 kb on + strand, within DvMF_1759 at 2150.735 kb on - strand, within DvMF_1759 at 2150.921 kb on + strand, within DvMF_1759 at 2150.955 kb on + strand, within DvMF_1759 at 2151.034 kb on + strand, within DvMF_1759 at 2151.338 kb on - strand, within DvMF_1759 at 2151.340 kb on + strand, within DvMF_1759 at 2151.340 kb on + strand, within DvMF_1759 at 2151.340 kb on + strand, within DvMF_1759
Per-strain Table
Position Strand Gene LocusTag Fraction Defined MoLS4 remove 2,145,822 - DvMF_1756 0.85 -1.9 2,145,822 - DvMF_1756 0.85 -2.0 2,145,897 + -0.6 2,145,950 - -0.6 2,146,134 - -0.1 2,146,155 - -0.1 2,146,190 - -0.7 2,146,425 - -0.5 2,146,541 + -0.1 2,146,560 - -0.0 2,146,609 + -0.5 2,146,949 - -0.4 2,146,949 - -0.3 2,147,117 - DvMF_1758 0.13 -0.3 2,147,117 - DvMF_1758 0.13 -0.5 2,147,358 + DvMF_1758 0.19 -0.5 2,147,583 + DvMF_1758 0.25 -0.6 2,148,011 + DvMF_1758 0.37 -0.3 2,148,125 - DvMF_1758 0.40 -0.3 2,148,459 + DvMF_1758 0.49 +0.3 2,148,472 + DvMF_1758 0.49 +0.5 2,148,668 - DvMF_1758 0.54 -0.7 2,148,687 + DvMF_1758 0.55 -0.4 2,148,975 + DvMF_1758 0.63 -0.5 2,148,989 + DvMF_1758 0.63 -0.4 2,149,048 + DvMF_1758 0.65 -0.4 2,149,171 - DvMF_1758 0.68 -0.2 2,149,196 + DvMF_1758 0.69 -0.1 2,149,606 - DvMF_1758 0.79 -0.6 2,149,614 - DvMF_1758 0.80 -0.5 2,149,860 + DvMF_1758 0.86 -0.2 2,149,860 + DvMF_1758 0.86 -1.0 2,150,090 + -0.5 2,150,301 + -0.3 2,150,363 - -0.0 2,150,442 + -1.5 2,150,477 - -0.5 2,150,735 + DvMF_1759 0.12 -0.2 2,150,735 - DvMF_1759 0.12 -0.5 2,150,921 + DvMF_1759 0.28 -1.4 2,150,955 + DvMF_1759 0.31 -0.3 2,151,034 + DvMF_1759 0.37 -0.5 2,151,338 - DvMF_1759 0.63 -0.9 2,151,340 + DvMF_1759 0.63 -0.8 2,151,340 + DvMF_1759 0.63 +0.0 2,151,340 + DvMF_1759 0.63 -0.0
Or see this region's nucleotide sequence