Experiment: Defined MoLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1242 and DvMF_1243 are separated by 295 nucleotides DvMF_1243 and DvMF_1244 are separated by 89 nucleotides
DvMF_1242: DvMF_1242 - Catalase (RefSeq), at 1,531,306 to 1,532,748
_1242
DvMF_1243: DvMF_1243 - multi-sensor signal transduction histidine kinase (RefSeq), at 1,533,044 to 1,535,248
_1243
DvMF_1244: DvMF_1244 - hypothetical protein (RefSeq), at 1,535,338 to 1,536,393
_1244
Position (kb)
1533
1534
1535
1536 Strain fitness (log2 ratio)
-1
0
1 at 1532.068 kb on + strand, within DvMF_1242 at 1532.159 kb on - strand, within DvMF_1242 at 1532.569 kb on - strand, within DvMF_1242 at 1532.846 kb on - strand at 1532.913 kb on + strand at 1532.926 kb on - strand at 1533.289 kb on + strand, within DvMF_1243 at 1533.289 kb on - strand, within DvMF_1243 at 1533.336 kb on + strand, within DvMF_1243 at 1533.422 kb on - strand, within DvMF_1243 at 1533.491 kb on + strand, within DvMF_1243 at 1533.782 kb on + strand, within DvMF_1243 at 1533.891 kb on + strand, within DvMF_1243 at 1534.252 kb on + strand, within DvMF_1243 at 1534.260 kb on - strand, within DvMF_1243 at 1534.316 kb on + strand, within DvMF_1243 at 1534.356 kb on - strand, within DvMF_1243 at 1534.366 kb on - strand, within DvMF_1243 at 1534.507 kb on + strand, within DvMF_1243 at 1534.625 kb on + strand, within DvMF_1243 at 1534.680 kb on - strand, within DvMF_1243 at 1534.682 kb on + strand, within DvMF_1243 at 1534.690 kb on - strand, within DvMF_1243 at 1535.001 kb on + strand, within DvMF_1243 at 1535.009 kb on - strand, within DvMF_1243 at 1535.059 kb on + strand at 1535.067 kb on - strand at 1535.281 kb on + strand at 1535.281 kb on + strand at 1535.281 kb on + strand at 1535.430 kb on - strand at 1535.463 kb on + strand, within DvMF_1244 at 1535.552 kb on + strand, within DvMF_1244 at 1535.741 kb on - strand, within DvMF_1244 at 1535.741 kb on - strand, within DvMF_1244 at 1535.874 kb on + strand, within DvMF_1244 at 1536.004 kb on + strand, within DvMF_1244 at 1536.077 kb on + strand, within DvMF_1244 at 1536.163 kb on - strand, within DvMF_1244
Per-strain Table
Position Strand Gene LocusTag Fraction Defined MoLS4 remove 1,532,068 + DvMF_1242 0.53 -0.1 1,532,159 - DvMF_1242 0.59 -0.2 1,532,569 - DvMF_1242 0.88 +0.2 1,532,846 - +0.1 1,532,913 + -0.5 1,532,926 - -0.5 1,533,289 + DvMF_1243 0.11 -0.2 1,533,289 - DvMF_1243 0.11 -0.8 1,533,336 + DvMF_1243 0.13 -0.4 1,533,422 - DvMF_1243 0.17 -0.4 1,533,491 + DvMF_1243 0.20 -1.0 1,533,782 + DvMF_1243 0.33 -0.3 1,533,891 + DvMF_1243 0.38 -0.4 1,534,252 + DvMF_1243 0.55 -0.3 1,534,260 - DvMF_1243 0.55 -0.6 1,534,316 + DvMF_1243 0.58 -0.4 1,534,356 - DvMF_1243 0.60 -0.7 1,534,366 - DvMF_1243 0.60 -0.2 1,534,507 + DvMF_1243 0.66 -0.5 1,534,625 + DvMF_1243 0.72 -0.4 1,534,680 - DvMF_1243 0.74 -0.3 1,534,682 + DvMF_1243 0.74 -0.5 1,534,690 - DvMF_1243 0.75 -0.3 1,535,001 + DvMF_1243 0.89 -0.1 1,535,009 - DvMF_1243 0.89 -0.1 1,535,059 + -0.5 1,535,067 - -0.5 1,535,281 + -0.0 1,535,281 + +0.8 1,535,281 + +0.1 1,535,430 - +0.3 1,535,463 + DvMF_1244 0.12 -0.4 1,535,552 + DvMF_1244 0.20 -0.8 1,535,741 - DvMF_1244 0.38 -1.3 1,535,741 - DvMF_1244 0.38 -0.4 1,535,874 + DvMF_1244 0.51 -0.5 1,536,004 + DvMF_1244 0.63 -0.8 1,536,077 + DvMF_1244 0.70 -0.5 1,536,163 - DvMF_1244 0.78 -0.9
Or see this region's nucleotide sequence