Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2755

Experiment: acetate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate (C)
3,286,203	+		Shewana3_2754	0.59	+0.8
3,286,208	+		Shewana3_2754	0.59	-2.1
3,286,247	+		Shewana3_2754	0.62	+1.2
3,286,293	+		Shewana3_2754	0.66	-0.7
3,286,301	-		Shewana3_2754	0.66	+0.0
3,286,323	-		Shewana3_2754	0.68	-0.8
3,286,352	-		Shewana3_2754	0.70	+0.7
3,286,371	+		Shewana3_2754	0.72	+0.7
3,286,474	+		Shewana3_2754	0.79	-1.4
3,286,509	+		Shewana3_2754	0.82	-1.5
3,286,683	-				+0.7
3,286,893	-				-1.3
3,287,028	-				-0.1
3,287,196	+				-1.7
3,287,386	+				+0.1
3,287,559	-		Shewana3_2755	0.14	+0.3
3,287,672	+		Shewana3_2755	0.17	+0.0
3,287,711	+		Shewana3_2755	0.19	-1.5
3,287,746	-		Shewana3_2755	0.20	-1.0
3,287,947	+		Shewana3_2755	0.26	+0.7
3,287,980	+		Shewana3_2755	0.27	+0.6
3,288,372	+		Shewana3_2755	0.39	+0.4
3,288,380	-		Shewana3_2755	0.39	+0.3
3,288,584	-		Shewana3_2755	0.45	+0.1
3,288,594	+		Shewana3_2755	0.46	-1.3
3,288,791	+		Shewana3_2755	0.52	-0.0
3,288,895	+		Shewana3_2755	0.55	+0.3
3,288,943	-		Shewana3_2755	0.57	+0.5
3,288,949	+		Shewana3_2755	0.57	+0.5
3,288,970	-		Shewana3_2755	0.57	+1.3
3,289,160	-		Shewana3_2755	0.63	-1.0
3,289,195	+		Shewana3_2755	0.64	+1.4
3,289,342	+		Shewana3_2755	0.69	-0.1
3,289,409	+		Shewana3_2755	0.71	+0.3
3,289,417	-		Shewana3_2755	0.71	+0.7
3,289,446	-		Shewana3_2755	0.72	-1.1
3,289,446	-		Shewana3_2755	0.72	-0.7
3,289,451	+		Shewana3_2755	0.72	+0.2
3,289,483	-		Shewana3_2755	0.73	+0.3
3,289,493	-		Shewana3_2755	0.74	+0.5
3,289,569	-		Shewana3_2755	0.76	+0.4
3,289,575	+		Shewana3_2755	0.76	-1.2
3,289,588	-		Shewana3_2755	0.76	+0.8
3,289,653	-		Shewana3_2755	0.78	+0.2
3,289,663	-		Shewana3_2755	0.79	-1.0
3,289,663	-		Shewana3_2755	0.79	+0.3
3,289,667	+		Shewana3_2755	0.79	+0.0
3,289,667	+		Shewana3_2755	0.79	+0.5
3,289,675	-		Shewana3_2755	0.79	+1.1
3,289,790	-		Shewana3_2755	0.83	-1.3
3,289,792	+		Shewana3_2755	0.83	+0.3
3,289,792	+		Shewana3_2755	0.83	-0.6
3,289,800	-		Shewana3_2755	0.83	+0.0
3,289,800	-		Shewana3_2755	0.83	+0.3
3,289,815	+		Shewana3_2755	0.83	+0.3
3,289,815	+		Shewana3_2755	0.83	+0.5
3,289,815	+		Shewana3_2755	0.83	+0.6
3,289,815	+		Shewana3_2755	0.83	+0.4
3,289,815	+		Shewana3_2755	0.83	+0.5
3,289,815	+		Shewana3_2755	0.83	-0.9
3,289,823	-		Shewana3_2755	0.84	-0.7
3,289,823	-		Shewana3_2755	0.84	+0.0
3,289,823	-		Shewana3_2755	0.84	+0.1
3,289,830	+		Shewana3_2755	0.84	+0.4
3,289,830	+		Shewana3_2755	0.84	+0.5
3,289,830	+		Shewana3_2755	0.84	+0.4
3,289,831	+		Shewana3_2755	0.84	+0.2
3,289,838	+		Shewana3_2755	0.84	-2.0
3,289,838	-		Shewana3_2755	0.84	+1.7
3,289,909	-		Shewana3_2755	0.86	+0.6
3,289,937	+		Shewana3_2755	0.87	-2.8
3,289,937	+		Shewana3_2755	0.87	-1.7
3,289,937	+		Shewana3_2755	0.87	+0.4
3,289,937	+		Shewana3_2755	0.87	+0.4
3,289,937	+		Shewana3_2755	0.87	-0.4
3,289,937	+		Shewana3_2755	0.87	+0.1
3,289,937	+		Shewana3_2755	0.87	+0.6
3,289,937	+		Shewana3_2755	0.87	+0.4
3,289,945	-		Shewana3_2755	0.87	-2.4
3,289,945	-		Shewana3_2755	0.87	-0.5
3,289,945	-		Shewana3_2755	0.87	+0.1
3,289,945	-		Shewana3_2755	0.87	-0.2
3,289,945	-		Shewana3_2755	0.87	-0.1
3,289,945	-		Shewana3_2755	0.87	+0.7
3,289,945	-		Shewana3_2755	0.87	-0.6
3,289,945	-		Shewana3_2755	0.87	+0.4
3,290,041	-				-1.5
3,290,262	-				-0.2
3,290,303	-				+0.8
3,290,340	+				+0.4
3,290,346	+				+0.7
3,290,356	+				+0.5
3,290,357	+				+0.3
3,290,357	+				-0.1
3,290,359	-				+0.9
3,290,367	+				-1.6
3,290,397	+				-0.0
3,290,398	+				-3.0
3,290,404	+				+0.6
3,290,432	-		Shewana3_2756	0.12	+0.6
3,290,454	+		Shewana3_2756	0.17	+0.4
3,290,454	+		Shewana3_2756	0.17	+0.4
3,290,454	+		Shewana3_2756	0.17	+1.5
3,290,454	+		Shewana3_2756	0.17	+0.7
3,290,460	+		Shewana3_2756	0.19	-1.6
3,290,462	-		Shewana3_2756	0.20	-0.3
3,290,462	-		Shewana3_2756	0.20	+0.1
3,290,472	-		Shewana3_2756	0.22	-1.7
3,290,478	+		Shewana3_2756	0.24	+0.2
3,290,479	-		Shewana3_2756	0.24	-1.3
3,290,483	+		Shewana3_2756	0.25	+2.8
3,290,486	+		Shewana3_2756	0.26	+0.0
3,290,486	+		Shewana3_2756	0.26	-1.1
3,290,493	+		Shewana3_2756	0.28	+0.4
3,290,493	+		Shewana3_2756	0.28	-1.5
3,290,493	+		Shewana3_2756	0.28	-1.7
3,290,494	-		Shewana3_2756	0.28	+0.2
3,290,494	-		Shewana3_2756	0.28	+0.4
3,290,494	-		Shewana3_2756	0.28	-0.2
3,290,494	-		Shewana3_2756	0.28	-1.0
3,290,499	-		Shewana3_2756	0.29	-0.9
3,290,501	-		Shewana3_2756	0.30	+0.9
3,290,501	-		Shewana3_2756	0.30	-0.2
3,290,501	-		Shewana3_2756	0.30	+0.2
3,290,513	+		Shewana3_2756	0.33	-0.9
3,290,527	+		Shewana3_2756	0.37	-1.3
3,290,580	-		Shewana3_2756	0.51	+0.1
3,290,628	+		Shewana3_2756	0.63	+0.4
3,290,634	+		Shewana3_2756	0.65	+0.5
3,290,665	+		Shewana3_2756	0.73	+0.4
3,290,696	+		Shewana3_2756	0.81	-0.3
3,290,811	+				-1.5
3,290,837	+				+0.3
3,291,170	+				+0.0
3,291,239	-		Shewana3_2757	0.14	-1.9