Experiment: L-Proline (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_0526 and Psest_0527 are separated by 66 nucleotides Psest_0527 and Psest_0528 are separated by 100 nucleotides Psest_0528 and Psest_0529 are separated by 117 nucleotides Psest_0529 and Psest_0530 are separated by 9 nucleotides
Psest_0526: Psest_0526 - hypothetical protein, at 579,813 to 580,262
_0526
Psest_0527: Psest_0527 - Uncharacterized conserved protein, at 580,329 to 581,102
_0527
Psest_0528: Psest_0528 - apolipoprotein N-acyltransferase, at 581,203 to 582,717
_0528
Psest_0529: Psest_0529 - Putative Mg2+ and Co2+ transporter CorC, at 582,835 to 583,677
_0529
Psest_0530: Psest_0530 - metalloprotein, YbeY/UPF0054 family, at 583,687 to 584,169
_0530
Position (kb) 581
582
583 Strain fitness (log2 ratio) -1
0
1
2 at 580.244 kb on + strand at 580.244 kb on + strand at 580.245 kb on - strand at 580.245 kb on - strand at 580.245 kb on - strand at 580.341 kb on + strand at 580.342 kb on - strand at 580.492 kb on + strand, within Psest_0527 at 580.493 kb on - strand, within Psest_0527 at 580.493 kb on - strand, within Psest_0527 at 580.493 kb on - strand, within Psest_0527 at 580.638 kb on + strand, within Psest_0527 at 580.638 kb on + strand, within Psest_0527 at 580.639 kb on - strand, within Psest_0527 at 580.723 kb on - strand, within Psest_0527 at 580.762 kb on + strand, within Psest_0527 at 580.762 kb on + strand, within Psest_0527 at 580.762 kb on + strand, within Psest_0527 at 580.762 kb on + strand, within Psest_0527 at 580.763 kb on - strand, within Psest_0527 at 580.763 kb on - strand, within Psest_0527 at 580.763 kb on - strand, within Psest_0527 at 580.763 kb on - strand, within Psest_0527 at 580.836 kb on + strand, within Psest_0527 at 580.836 kb on + strand, within Psest_0527 at 580.836 kb on + strand, within Psest_0527 at 580.836 kb on + strand, within Psest_0527 at 580.836 kb on + strand, within Psest_0527 at 580.836 kb on + strand, within Psest_0527 at 580.836 kb on + strand, within Psest_0527 at 580.836 kb on + strand, within Psest_0527 at 580.836 kb on + strand, within Psest_0527 at 580.837 kb on - strand, within Psest_0527 at 580.837 kb on - strand, within Psest_0527 at 580.837 kb on - strand, within Psest_0527 at 580.837 kb on - strand, within Psest_0527 at 580.837 kb on - strand, within Psest_0527 at 580.837 kb on - strand, within Psest_0527 at 580.902 kb on - strand, within Psest_0527 at 580.902 kb on - strand, within Psest_0527 at 581.082 kb on + strand at 581.083 kb on - strand at 582.735 kb on + strand at 582.735 kb on + strand at 582.735 kb on + strand at 582.736 kb on - strand at 582.736 kb on - strand at 582.736 kb on - strand at 582.736 kb on - strand at 582.736 kb on - strand at 582.736 kb on - strand at 582.736 kb on - strand at 582.736 kb on - strand at 582.821 kb on + strand at 582.821 kb on + strand at 582.836 kb on + strand at 582.837 kb on - strand at 582.896 kb on - strand at 583.017 kb on - strand, within Psest_0529 at 583.085 kb on + strand, within Psest_0529 at 583.085 kb on + strand, within Psest_0529 at 583.085 kb on + strand, within Psest_0529 at 583.085 kb on + strand, within Psest_0529 at 583.085 kb on + strand, within Psest_0529 at 583.085 kb on + strand, within Psest_0529 at 583.085 kb on + strand, within Psest_0529 at 583.085 kb on + strand, within Psest_0529 at 583.085 kb on + strand, within Psest_0529 at 583.085 kb on + strand, within Psest_0529 at 583.085 kb on + strand, within Psest_0529 at 583.085 kb on + strand, within Psest_0529 at 583.085 kb on + strand, within Psest_0529 at 583.085 kb on + strand, within Psest_0529 at 583.085 kb on + strand, within Psest_0529 at 583.086 kb on - strand, within Psest_0529 at 583.086 kb on - strand, within Psest_0529 at 583.086 kb on - strand, within Psest_0529 at 583.086 kb on - strand, within Psest_0529 at 583.086 kb on - strand, within Psest_0529 at 583.086 kb on - strand, within Psest_0529 at 583.086 kb on - strand, within Psest_0529 at 583.086 kb on - strand, within Psest_0529 at 583.086 kb on - strand, within Psest_0529 at 583.086 kb on - strand, within Psest_0529 at 583.086 kb on - strand, within Psest_0529 at 583.489 kb on + strand, within Psest_0529 at 583.489 kb on + strand, within Psest_0529 at 583.490 kb on - strand, within Psest_0529 at 583.490 kb on - strand, within Psest_0529 at 583.586 kb on - strand, within Psest_0529 at 583.586 kb on - strand, within Psest_0529
Per-strain Table
Position Strand Gene LocusTag Fraction L-Proline (C) remove 580,244 + +0.0 580,244 + -0.1 580,245 - -0.1 580,245 - +0.3 580,245 - +1.2 580,341 + +0.1 580,342 - -0.1 580,492 + Psest_0527 0.21 +0.1 580,493 - Psest_0527 0.21 +0.3 580,493 - Psest_0527 0.21 +0.6 580,493 - Psest_0527 0.21 +1.7 580,638 + Psest_0527 0.40 +0.6 580,638 + Psest_0527 0.40 +0.1 580,639 - Psest_0527 0.40 -0.2 580,723 - Psest_0527 0.51 +0.6 580,762 + Psest_0527 0.56 +0.3 580,762 + Psest_0527 0.56 +0.3 580,762 + Psest_0527 0.56 -0.5 580,762 + Psest_0527 0.56 +0.2 580,763 - Psest_0527 0.56 +0.4 580,763 - Psest_0527 0.56 +0.1 580,763 - Psest_0527 0.56 +0.6 580,763 - Psest_0527 0.56 +0.6 580,836 + Psest_0527 0.66 +0.9 580,836 + Psest_0527 0.66 +0.2 580,836 + Psest_0527 0.66 +0.4 580,836 + Psest_0527 0.66 +0.1 580,836 + Psest_0527 0.66 +0.1 580,836 + Psest_0527 0.66 +0.3 580,836 + Psest_0527 0.66 +0.8 580,836 + Psest_0527 0.66 -0.1 580,836 + Psest_0527 0.66 -0.0 580,837 - Psest_0527 0.66 +1.6 580,837 - Psest_0527 0.66 +0.6 580,837 - Psest_0527 0.66 +0.2 580,837 - Psest_0527 0.66 +0.5 580,837 - Psest_0527 0.66 +0.1 580,837 - Psest_0527 0.66 +0.5 580,902 - Psest_0527 0.74 +0.4 580,902 - Psest_0527 0.74 -0.1 581,082 + +0.2 581,083 - +0.2 582,735 + -0.9 582,735 + +0.2 582,735 + +0.8 582,736 - +2.1 582,736 - +0.2 582,736 - +0.6 582,736 - +0.5 582,736 - +0.5 582,736 - +0.6 582,736 - +0.9 582,736 - +0.2 582,821 + -1.2 582,821 + -0.1 582,836 + +0.2 582,837 - +0.6 582,896 - +1.3 583,017 - Psest_0529 0.22 +0.5 583,085 + Psest_0529 0.30 -0.0 583,085 + Psest_0529 0.30 +0.3 583,085 + Psest_0529 0.30 -1.0 583,085 + Psest_0529 0.30 +0.3 583,085 + Psest_0529 0.30 -0.5 583,085 + Psest_0529 0.30 -1.0 583,085 + Psest_0529 0.30 -0.2 583,085 + Psest_0529 0.30 +0.8 583,085 + Psest_0529 0.30 +0.1 583,085 + Psest_0529 0.30 -0.2 583,085 + Psest_0529 0.30 +0.1 583,085 + Psest_0529 0.30 -0.3 583,085 + Psest_0529 0.30 +0.5 583,085 + Psest_0529 0.30 +0.6 583,085 + Psest_0529 0.30 +0.0 583,086 - Psest_0529 0.30 +0.1 583,086 - Psest_0529 0.30 -0.9 583,086 - Psest_0529 0.30 +0.4 583,086 - Psest_0529 0.30 +0.7 583,086 - Psest_0529 0.30 +0.3 583,086 - Psest_0529 0.30 -0.6 583,086 - Psest_0529 0.30 -0.0 583,086 - Psest_0529 0.30 +0.1 583,086 - Psest_0529 0.30 -0.1 583,086 - Psest_0529 0.30 +0.0 583,086 - Psest_0529 0.30 +0.3 583,489 + Psest_0529 0.78 +0.4 583,489 + Psest_0529 0.78 +0.2 583,490 - Psest_0529 0.78 +0.6 583,490 - Psest_0529 0.78 +1.2 583,586 - Psest_0529 0.89 +0.9 583,586 - Psest_0529 0.89 +0.2
Or see this region's nucleotide sequence