Strain Fitness in Marinobacter adhaerens HP15 around HP15_354

Experiment: L-Leucine as (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_352 and HP15_353 are separated by 16 nucleotidesHP15_353 and HP15_354 are separated by 1 nucleotidesHP15_354 and HP15_355 are separated by 63 nucleotidesHP15_355 and HP15_356 are separated by 13 nucleotides HP15_352: HP15_352 - N-acetyl-gamma-glutamyl-phosphate reductase, at 347,025 to 348,191 _352 HP15_353: HP15_353 - conserved hypothetical protein, at 348,208 to 348,948 _353 HP15_354: HP15_354 - protein containing DUF583, at 348,950 to 349,435 _354 HP15_355: HP15_355 - FeS cluster insertion, at 349,499 to 349,852 _355 HP15_356: HP15_356 - anhydro-N-acetylmuramic acid kinase, at 349,866 to 350,963 _356 Position (kb) 348 349 350Strain fitness (log2 ratio) -3 -2 -1 0 1at 347.992 kb on + strand, within HP15_352at 348.046 kb on + strand, within HP15_352at 348.423 kb on + strand, within HP15_353at 348.838 kb on - strand, within HP15_353at 348.917 kb on + strandat 348.925 kb on - strandat 349.112 kb on + strand, within HP15_354at 349.195 kb on + strand, within HP15_354

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Leucine as (N)
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347,992 + HP15_352 0.83 -2.6
348,046 + HP15_352 0.87 -3.4
348,423 + HP15_353 0.29 +0.7
348,838 - HP15_353 0.85 -1.7
348,917 + +0.3
348,925 - -0.4
349,112 + HP15_354 0.33 -0.8
349,195 + HP15_354 0.50 -0.8

Or see this region's nucleotide sequence