Strain Fitness in Marinobacter adhaerens HP15 around HP15_3015

Experiment: L-Leucine as (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_3014 and HP15_3015 overlap by 1 nucleotidesHP15_3015 and HP15_3016 are separated by 75 nucleotidesHP15_3016 and HP15_tRNA48 are separated by 121 nucleotides HP15_3014: HP15_3014 - AsmA family protein, at 3,157,913 to 3,160,078 _3014 HP15_3015: HP15_3015 - A/G-specific adenine glycosylase-like protein, at 3,160,078 to 3,161,145 _3015 HP15_3016: HP15_3016 - Ion traffic superfamily protein, at 3,161,221 to 3,161,493 _3016 HP15_tRNA48: HP15_tRNA48 - tRNA-Phe, at 3,161,615 to 3,161,690 _tRNA48 Position (kb) 3160 3161 3162Strain fitness (log2 ratio) -1 0 1at 3159.198 kb on + strand, within HP15_3014at 3159.206 kb on - strand, within HP15_3014at 3159.206 kb on - strand, within HP15_3014at 3159.235 kb on + strand, within HP15_3014at 3159.283 kb on + strand, within HP15_3014at 3159.291 kb on - strand, within HP15_3014at 3159.530 kb on + strand, within HP15_3014at 3159.539 kb on - strand, within HP15_3014at 3159.561 kb on + strand, within HP15_3014at 3159.568 kb on + strand, within HP15_3014at 3159.639 kb on + strand, within HP15_3014at 3159.639 kb on + strand, within HP15_3014at 3159.647 kb on - strand, within HP15_3014at 3159.647 kb on - strand, within HP15_3014at 3159.721 kb on + strand, within HP15_3014at 3159.947 kb on - strandat 3159.985 kb on - strandat 3159.986 kb on + strandat 3159.994 kb on - strandat 3159.994 kb on - strandat 3160.057 kb on + strandat 3160.077 kb on - strandat 3160.259 kb on + strand, within HP15_3015at 3160.312 kb on - strand, within HP15_3015at 3160.431 kb on + strand, within HP15_3015at 3160.460 kb on - strand, within HP15_3015at 3160.494 kb on + strand, within HP15_3015at 3160.597 kb on - strand, within HP15_3015at 3160.610 kb on + strand, within HP15_3015at 3160.618 kb on - strand, within HP15_3015at 3160.711 kb on - strand, within HP15_3015at 3160.728 kb on - strand, within HP15_3015at 3160.730 kb on + strand, within HP15_3015at 3160.883 kb on + strand, within HP15_3015at 3160.997 kb on - strand, within HP15_3015at 3160.997 kb on - strand, within HP15_3015at 3161.142 kb on - strandat 3161.266 kb on + strand, within HP15_3016at 3161.274 kb on - strand, within HP15_3016at 3161.281 kb on + strand, within HP15_3016at 3161.299 kb on + strand, within HP15_3016at 3161.398 kb on - strand, within HP15_3016at 3161.460 kb on - strand, within HP15_3016at 3161.511 kb on - strandat 3161.753 kb on - strandat 3161.797 kb on - strandat 3161.899 kb on + strandat 3161.982 kb on + strandat 3162.086 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Leucine as (N)
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3,159,198 + HP15_3014 0.59 -0.4
3,159,206 - HP15_3014 0.60 -0.6
3,159,206 - HP15_3014 0.60 -0.4
3,159,235 + HP15_3014 0.61 -1.0
3,159,283 + HP15_3014 0.63 +0.5
3,159,291 - HP15_3014 0.64 -1.0
3,159,530 + HP15_3014 0.75 -0.2
3,159,539 - HP15_3014 0.75 -0.3
3,159,561 + HP15_3014 0.76 +0.2
3,159,568 + HP15_3014 0.76 +0.6
3,159,639 + HP15_3014 0.80 +1.6
3,159,639 + HP15_3014 0.80 +0.5
3,159,647 - HP15_3014 0.80 +1.2
3,159,647 - HP15_3014 0.80 -0.6
3,159,721 + HP15_3014 0.83 -1.5
3,159,947 - -0.7
3,159,985 - +0.1
3,159,986 + +0.5
3,159,994 - -0.2
3,159,994 - +1.1
3,160,057 + -0.3
3,160,077 - -0.0
3,160,259 + HP15_3015 0.17 -0.0
3,160,312 - HP15_3015 0.22 +0.5
3,160,431 + HP15_3015 0.33 -0.9
3,160,460 - HP15_3015 0.36 -0.4
3,160,494 + HP15_3015 0.39 -0.6
3,160,597 - HP15_3015 0.49 -0.6
3,160,610 + HP15_3015 0.50 -1.3
3,160,618 - HP15_3015 0.51 -0.1
3,160,711 - HP15_3015 0.59 +1.7
3,160,728 - HP15_3015 0.61 +1.5
3,160,730 + HP15_3015 0.61 -1.5
3,160,883 + HP15_3015 0.75 -0.9
3,160,997 - HP15_3015 0.86 -0.2
3,160,997 - HP15_3015 0.86 -0.8
3,161,142 - +0.4
3,161,266 + HP15_3016 0.16 -0.3
3,161,274 - HP15_3016 0.19 +0.7
3,161,281 + HP15_3016 0.22 -0.2
3,161,299 + HP15_3016 0.29 -1.1
3,161,398 - HP15_3016 0.65 -0.2
3,161,460 - HP15_3016 0.88 -0.1
3,161,511 - +1.2
3,161,753 - -0.4
3,161,797 - +1.1
3,161,899 + -0.6
3,161,982 + +1.2
3,162,086 - +0.2

Or see this region's nucleotide sequence