Experiment: L-Leucine as (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_2302 and HP15_2303 are separated by 31 nucleotides HP15_2303 and HP15_2304 are separated by 92 nucleotides HP15_2304 and HP15_2305 are separated by 60 nucleotides
HP15_2302: HP15_2302 - flagellar biosynthesis sigma factor FliA, at 2,422,999 to 2,423,742
_2302
HP15_2303: HP15_2303 - flagellar synthesis regulator FleN, at 2,423,774 to 2,424,562
_2303
HP15_2304: HP15_2304 - flagellar biosynthesis regulator FlhF, at 2,424,655 to 2,425,962
_2304
HP15_2305: HP15_2305 - flagellar biosynthesis protein A, at 2,426,023 to 2,428,263
_2305
Position (kb)
2424
2425
2426 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2424.042 kb on + strand, within HP15_2303 at 2424.109 kb on + strand, within HP15_2303 at 2424.117 kb on - strand, within HP15_2303 at 2424.290 kb on + strand, within HP15_2303 at 2424.493 kb on + strand at 2424.625 kb on - strand at 2424.640 kb on - strand at 2424.751 kb on - strand at 2424.762 kb on - strand at 2424.891 kb on + strand, within HP15_2304 at 2425.021 kb on + strand, within HP15_2304 at 2425.024 kb on - strand, within HP15_2304 at 2425.029 kb on - strand, within HP15_2304 at 2425.029 kb on - strand, within HP15_2304 at 2425.034 kb on - strand, within HP15_2304 at 2425.173 kb on + strand, within HP15_2304 at 2425.263 kb on + strand, within HP15_2304 at 2425.296 kb on + strand, within HP15_2304 at 2425.326 kb on + strand, within HP15_2304 at 2425.413 kb on - strand, within HP15_2304 at 2425.413 kb on - strand, within HP15_2304 at 2425.451 kb on - strand, within HP15_2304 at 2425.561 kb on + strand, within HP15_2304 at 2425.592 kb on + strand, within HP15_2304 at 2425.615 kb on + strand, within HP15_2304 at 2425.785 kb on - strand, within HP15_2304 at 2425.831 kb on - strand, within HP15_2304 at 2425.904 kb on + strand at 2425.912 kb on - strand at 2425.928 kb on + strand at 2425.928 kb on + strand at 2425.928 kb on + strand at 2426.053 kb on - strand at 2426.105 kb on - strand at 2426.197 kb on + strand at 2426.199 kb on + strand at 2426.199 kb on + strand at 2426.542 kb on + strand, within HP15_2305 at 2426.620 kb on - strand, within HP15_2305 at 2426.622 kb on + strand, within HP15_2305 at 2426.690 kb on + strand, within HP15_2305 at 2426.702 kb on + strand, within HP15_2305 at 2426.702 kb on - strand, within HP15_2305 at 2426.720 kb on - strand, within HP15_2305 at 2426.900 kb on - strand, within HP15_2305 at 2426.940 kb on - strand, within HP15_2305 at 2426.940 kb on - strand, within HP15_2305
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine as (N) remove 2,424,042 + HP15_2303 0.34 -2.9 2,424,109 + HP15_2303 0.42 +0.1 2,424,117 - HP15_2303 0.43 -1.7 2,424,290 + HP15_2303 0.65 +0.6 2,424,493 + +1.0 2,424,625 - +1.0 2,424,640 - -0.0 2,424,751 - -0.0 2,424,762 - +1.0 2,424,891 + HP15_2304 0.18 +1.7 2,425,021 + HP15_2304 0.28 +0.6 2,425,024 - HP15_2304 0.28 +1.2 2,425,029 - HP15_2304 0.29 +0.4 2,425,029 - HP15_2304 0.29 +1.2 2,425,034 - HP15_2304 0.29 +0.4 2,425,173 + HP15_2304 0.40 +1.7 2,425,263 + HP15_2304 0.46 +0.5 2,425,296 + HP15_2304 0.49 +1.3 2,425,326 + HP15_2304 0.51 +0.2 2,425,413 - HP15_2304 0.58 +0.6 2,425,413 - HP15_2304 0.58 +0.4 2,425,451 - HP15_2304 0.61 +1.2 2,425,561 + HP15_2304 0.69 +0.3 2,425,592 + HP15_2304 0.72 +0.5 2,425,615 + HP15_2304 0.73 +0.3 2,425,785 - HP15_2304 0.86 +0.8 2,425,831 - HP15_2304 0.90 +0.8 2,425,904 + +1.1 2,425,912 - +1.0 2,425,928 + +1.2 2,425,928 + +0.4 2,425,928 + +0.3 2,426,053 - +1.6 2,426,105 - +1.5 2,426,197 + +1.1 2,426,199 + +1.4 2,426,199 + +1.4 2,426,542 + HP15_2305 0.23 +1.6 2,426,620 - HP15_2305 0.27 +1.0 2,426,622 + HP15_2305 0.27 +2.7 2,426,690 + HP15_2305 0.30 +1.6 2,426,702 + HP15_2305 0.30 +2.5 2,426,702 - HP15_2305 0.30 +1.7 2,426,720 - HP15_2305 0.31 +1.5 2,426,900 - HP15_2305 0.39 +1.7 2,426,940 - HP15_2305 0.41 +1.0 2,426,940 - HP15_2305 0.41 +2.0
Or see this region's nucleotide sequence