Experiment: L-Proline (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_0221 and Psest_0222 are separated by 101 nucleotides Psest_0222 and Psest_0223 are separated by 146 nucleotides Psest_0223 and Psest_0224 are separated by 123 nucleotides
Psest_0221: Psest_0221 - phosphate ABC transporter, permease protein PstA, at 229,072 to 230,742
_0221
Psest_0222: Psest_0222 - phosphate ABC transporter, ATP-binding protein, at 230,844 to 231,671
_0222
Psest_0223: Psest_0223 - phosphate transport system regulatory protein PhoU, at 231,818 to 232,546
_0223
Psest_0224: Psest_0224 - Transcriptional regulator, at 232,670 to 233,584
_0224
Position (kb) 230
231
232 Strain fitness (log2 ratio) -1
0
1
2 at 230.536 kb on + strand, within Psest_0221 at 230.536 kb on + strand, within Psest_0221 at 230.583 kb on + strand at 230.583 kb on + strand at 230.587 kb on + strand at 230.587 kb on + strand at 230.638 kb on + strand at 230.660 kb on + strand at 230.695 kb on + strand at 230.695 kb on + strand at 230.695 kb on + strand at 230.695 kb on + strand at 230.722 kb on + strand at 230.722 kb on + strand at 230.722 kb on + strand at 230.722 kb on + strand at 230.722 kb on + strand at 230.722 kb on + strand at 230.722 kb on + strand at 230.722 kb on + strand at 230.808 kb on + strand at 231.749 kb on + strand at 232.524 kb on + strand at 232.524 kb on + strand at 232.524 kb on + strand at 232.524 kb on + strand at 232.524 kb on + strand at 232.524 kb on + strand at 232.524 kb on + strand at 232.525 kb on - strand at 232.525 kb on - strand at 232.525 kb on - strand at 232.612 kb on + strand at 232.634 kb on + strand at 232.634 kb on + strand at 232.635 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Proline (C) remove 230,536 + Psest_0221 0.88 -0.3 230,536 + Psest_0221 0.88 +0.1 230,583 + -0.4 230,583 + +0.1 230,587 + +0.3 230,587 + -0.2 230,638 + +0.3 230,660 + -0.5 230,695 + +0.7 230,695 + +0.4 230,695 + +0.7 230,695 + +1.9 230,722 + +0.7 230,722 + -0.4 230,722 + +0.0 230,722 + -0.4 230,722 + +0.2 230,722 + +0.3 230,722 + +0.7 230,722 + +0.6 230,808 + +0.6 231,749 + +0.1 232,524 + +0.3 232,524 + +0.9 232,524 + -0.1 232,524 + +1.7 232,524 + +0.6 232,524 + +0.1 232,524 + -0.1 232,525 - +1.6 232,525 - +0.7 232,525 - -0.7 232,612 + -0.1 232,634 + +1.1 232,634 + +1.0 232,635 - +0.2
Or see this region's nucleotide sequence